{
  "anim_execution": {
    "amendment": "P1-ANIM-MUMMER4-r1",
    "configured_pair_timeout": null,
    "configured_query_budget": null,
    "diagnostic_origin": "generated",
    "execution_profile": "terobacter.anim-execution/2",
    "inherited_restrictions": {
      "address_space": {
        "hard": null,
        "soft": null
      },
      "cpu": {
        "hard": null,
        "soft": null
      },
      "data": {
        "hard": null,
        "soft": null
      },
      "file_size": {
        "hard": null,
        "soft": null
      },
      "resident_set": {
        "hard": 67108864000,
        "soft": 67108864000
      },
      "stack": {
        "hard": null,
        "soft": 8388608
      }
    },
    "memory_mib": null,
    "method_profile": "reciprocal-mummer4-4.0.1-preserve-n-mum-1-span-v1",
    "not_run_reference_ids": [],
    "pair_seconds": null,
    "pair_workers": 1,
    "pairs": [],
    "query_seconds": null,
    "query_threads": 1,
    "stop_reason": "not_required",
    "wall_seconds": 0.000498798
  },
  "anim_plan": {
    "anim_executed": false,
    "blocking_reasons": [],
    "contract_revision": "P1-r1",
    "counts": {
      "attempted": 0,
      "completed": 0,
      "failed": 0,
      "missing_orientation": 0,
      "no_alignment": 0,
      "not_run": 0,
      "required": 0,
      "supplied_outside_plan": 0,
      "unit": "reciprocal_pair"
    },
    "decisive_vetoes": [],
    "implementation": {
      "name": "pterobacter",
      "version": "0.0.0"
    },
    "input": {
      "anim": {
        "binding": "supplied_records",
        "bound_pairs": [],
        "excluded": [],
        "method_profile": null,
        "other_query_records": 0,
        "source": "supplied_saved_records",
        "unattributed_records": 0
      },
      "engine_version": "0.3.2",
      "evidence_schema": "2.0.0-dev-evidence",
      "evidence_sha256": "fa30effe40ead1906508371b3e110d4a4a982991c675e2122d7703767103b9b7",
      "kind": "assembly",
      "mask": {
        "assessed_panel_reference_count": 140,
        "excluded_reference_ids": [],
        "panel_reference_count": 140
      },
      "primary_inventory_sha256": "254ae64f778017decf384eb946997722f73f9ae25e1001fc25cd1eb7f72b305b",
      "query_sha256": "603ed679732e01cb7d1a06ec73d89a53fc12b6f6b22f071df5dee866cdf982b9",
      "reference_package_sha256": "f7c82d8e912fdb08aec93b190316f482fd462b3c514c5b374f8c694af1278e28",
      "verification": "pure_contract_checks; external_artifacts_and_origin_require_file_wrapper"
    },
    "known_challenges": [],
    "max_skani_ani_percent": 100.0,
    "nearest_parent": null,
    "outstanding_competitors": [],
    "outstanding_witnesses": [],
    "passing_witness": null,
    "policy_id": "conservative-assembly-anim-v2",
    "policy_mode": "default_candidate",
    "requested_pairs": [],
    "schema": "terobacter.rescue-plan/1",
    "settings_sha256": "a09608fda315c530db1f6699c4e25e3e6ac0c2b26cde26e60dbe9c467110089b",
    "stage": "not_triggered",
    "thresholds": {
      "both_af_minimum": "80",
      "conflict_ani": "96",
      "species_ani": "96",
      "subspecies_ani": "98",
      "subspecies_margin_percentage_points": "1",
      "supplied": null,
      "trigger_lower_ani": "94.5"
    },
    "trigger": false,
    "trigger_state": "at_or_above_96_v1_route",
    "validation_status": "not_yet_validated",
    "witness_candidates": []
  },
  "call_basis": "skani",
  "challenge_evidence": [],
  "challenges": [],
  "competitor_evaluation": "not_required",
  "contract_revision": "P1-r1",
  "counts": {
    "attempted": 0,
    "completed": 0,
    "failed": 0,
    "missing_orientation": 0,
    "no_alignment": 0,
    "not_run": 0,
    "required": 0,
    "supplied_outside_plan": 0,
    "unit": "reciprocal_pair"
  },
  "data_provenance": {
    "anim_evidence_directory": "single-alignments",
    "anim_manifest_sha256": "02cd57a36119558ae62b93d8d87b1ef5563f3c8009040fa0867da13027ad195d",
    "anim_trust": "embedded_catalogue",
    "catalogue_sha256": "873353f91dee10efc5f41ec86daceeeb5a6e841e97e885fdd7912853dda25ff9",
    "citation": {
      "doi": "10.6084/m9.figshare.34640883.v1",
      "record_version": 1,
      "title": "Enterobacter reference database for Pterobacter, version 2026-10-15",
      "url": "https://figshare.com/articles/dataset/Enterobacter_reference_database_for_Pterobacter_version_2026-10-15/34640883"
    },
    "database": "enterobacter-reference",
    "mlst_manifest_sha256": "0f0a4bd051e7a29d97f530a38982026df10ca223805e7b0147b19796763978dd",
    "mlst_requested": true,
    "mlst_trust": "embedded_catalogue",
    "reference_manifest_sha256": "f7c82d8e912fdb08aec93b190316f482fd462b3c514c5b374f8c694af1278e28",
    "reference_trust": "embedded_catalogue",
    "status": "published",
    "version": "2026-10-15"
  },
  "evaluation_status": "complete",
  "evidence": {
    "assignment": {
      "genomovar_id": null,
      "lineage_id": null,
      "reason": "native_decision_pending",
      "species_id": null,
      "species_name": null,
      "status": "not_evaluated",
      "subspecies_id": null,
      "subspecies_name": null
    },
    "duplicate_rows_collapsed": 0,
    "evidence_status": "estimates_returned",
    "input_kind": "assembly",
    "nearest_reference_ids": [
      "primary_whole:GCA_013738375.1"
    ],
    "not_returned_reference_count": 0,
    "provenance": {
      "engine_version": "0.3.2",
      "input_kind": "assembly",
      "query_sha256": "603ed679732e01cb7d1a06ec73d89a53fc12b6f6b22f071df5dee866cdf982b9",
      "reference_component_id": "primary_whole",
      "reference_package_sha256": "f7c82d8e912fdb08aec93b190316f482fd462b3c514c5b374f8c694af1278e28",
      "search_exit_code": 0,
      "sequence_scope": "whole_assembly_as_supplied"
    },
    "ranked_reference_evidence": [
      {
        "aligned_fraction_query_percent": 99.99,
        "aligned_fraction_reference_percent": 99.99,
        "ani_percent": 100.00,
        "lineage_id": "",
        "minimum_directional_af_percent": 99.99,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_013738375.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS007",
        "subspecies_name": "Enterobacter xiangfangensis subsp. hoffmannii"
      },
      {
        "aligned_fraction_query_percent": 82.69,
        "aligned_fraction_reference_percent": 92.17,
        "ani_percent": 98.97,
        "lineage_id": "",
        "minimum_directional_af_percent": 82.69,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_001729745.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS007",
        "subspecies_name": "Enterobacter xiangfangensis subsp. hoffmannii"
      },
      {
        "aligned_fraction_query_percent": 85.66,
        "aligned_fraction_reference_percent": 90.75,
        "ani_percent": 98.97,
        "lineage_id": "",
        "minimum_directional_af_percent": 85.66,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_013625435.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS007",
        "subspecies_name": "Enterobacter xiangfangensis subsp. hoffmannii"
      },
      {
        "aligned_fraction_query_percent": 85.51,
        "aligned_fraction_reference_percent": 91.21,
        "ani_percent": 98.97,
        "lineage_id": "",
        "minimum_directional_af_percent": 85.51,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_052922205.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS007",
        "subspecies_name": "Enterobacter xiangfangensis subsp. hoffmannii"
      },
      {
        "aligned_fraction_query_percent": 83.07,
        "aligned_fraction_reference_percent": 90.16,
        "ani_percent": 98.92,
        "lineage_id": "",
        "minimum_directional_af_percent": 83.07,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_027595125.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS007",
        "subspecies_name": "Enterobacter xiangfangensis subsp. hoffmannii"
      },
      {
        "aligned_fraction_query_percent": 83.56,
        "aligned_fraction_reference_percent": 89.63,
        "ani_percent": 98.88,
        "lineage_id": "",
        "minimum_directional_af_percent": 83.56,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_040096145.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS007",
        "subspecies_name": "Enterobacter xiangfangensis subsp. hoffmannii"
      },
      {
        "aligned_fraction_query_percent": 84.38,
        "aligned_fraction_reference_percent": 86.96,
        "ani_percent": 98.61,
        "lineage_id": "",
        "minimum_directional_af_percent": 84.38,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_052921675.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS007",
        "subspecies_name": "Enterobacter xiangfangensis subsp. hoffmannii"
      },
      {
        "aligned_fraction_query_percent": 85.41,
        "aligned_fraction_reference_percent": 86.58,
        "ani_percent": 98.60,
        "lineage_id": "",
        "minimum_directional_af_percent": 85.41,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_009834325.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS007",
        "subspecies_name": "Enterobacter xiangfangensis subsp. hoffmannii"
      },
      {
        "aligned_fraction_query_percent": 81.75,
        "aligned_fraction_reference_percent": 87.21,
        "ani_percent": 96.08,
        "lineage_id": "",
        "minimum_directional_af_percent": 81.75,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_013731155.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS008",
        "subspecies_name": "Enterobacter xiangfangensis subsp. oharae"
      },
      {
        "aligned_fraction_query_percent": 80.09,
        "aligned_fraction_reference_percent": 86.85,
        "ani_percent": 95.89,
        "lineage_id": "",
        "minimum_directional_af_percent": 80.09,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_013743755.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS008",
        "subspecies_name": "Enterobacter xiangfangensis subsp. oharae"
      },
      {
        "aligned_fraction_query_percent": 78.60,
        "aligned_fraction_reference_percent": 84.53,
        "ani_percent": 95.77,
        "lineage_id": "",
        "minimum_directional_af_percent": 78.60,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_013726395.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS008",
        "subspecies_name": "Enterobacter xiangfangensis subsp. oharae"
      },
      {
        "aligned_fraction_query_percent": 75.89,
        "aligned_fraction_reference_percent": 80.84,
        "ani_percent": 95.77,
        "lineage_id": "",
        "minimum_directional_af_percent": 75.89,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_032389435.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS009",
        "subspecies_name": "Enterobacter xiangfangensis subsp. steigerwaltii"
      },
      {
        "aligned_fraction_query_percent": 78.83,
        "aligned_fraction_reference_percent": 87.02,
        "ani_percent": 95.75,
        "lineage_id": "",
        "minimum_directional_af_percent": 78.83,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_001729705.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS008",
        "subspecies_name": "Enterobacter xiangfangensis subsp. oharae"
      },
      {
        "aligned_fraction_query_percent": 79.95,
        "aligned_fraction_reference_percent": 85.91,
        "ani_percent": 95.75,
        "lineage_id": "",
        "minimum_directional_af_percent": 79.95,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_013743295.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS008",
        "subspecies_name": "Enterobacter xiangfangensis subsp. oharae"
      },
      {
        "aligned_fraction_query_percent": 80.45,
        "aligned_fraction_reference_percent": 83.23,
        "ani_percent": 95.74,
        "lineage_id": "",
        "minimum_directional_af_percent": 80.45,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_002204775.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS010",
        "subspecies_name": "Enterobacter xiangfangensis subsp. xiangfangensis"
      },
      {
        "aligned_fraction_query_percent": 77.80,
        "aligned_fraction_reference_percent": 83.39,
        "ani_percent": 95.74,
        "lineage_id": "",
        "minimum_directional_af_percent": 77.80,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_025369895.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS010",
        "subspecies_name": "Enterobacter xiangfangensis subsp. xiangfangensis"
      },
      {
        "aligned_fraction_query_percent": 79.60,
        "aligned_fraction_reference_percent": 84.97,
        "ani_percent": 95.74,
        "lineage_id": "",
        "minimum_directional_af_percent": 79.60,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_030848005.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS010",
        "subspecies_name": "Enterobacter xiangfangensis subsp. xiangfangensis"
      },
      {
        "aligned_fraction_query_percent": 78.22,
        "aligned_fraction_reference_percent": 87.50,
        "ani_percent": 95.72,
        "lineage_id": "",
        "minimum_directional_af_percent": 78.22,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_001729785.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS010",
        "subspecies_name": "Enterobacter xiangfangensis subsp. xiangfangensis"
      },
      {
        "aligned_fraction_query_percent": 78.02,
        "aligned_fraction_reference_percent": 84.78,
        "ani_percent": 95.64,
        "lineage_id": "",
        "minimum_directional_af_percent": 78.02,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_051092005.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS010",
        "subspecies_name": "Enterobacter xiangfangensis subsp. xiangfangensis"
      },
      {
        "aligned_fraction_query_percent": 79.87,
        "aligned_fraction_reference_percent": 83.21,
        "ani_percent": 95.64,
        "lineage_id": "",
        "minimum_directional_af_percent": 79.87,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_053699795.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS009",
        "subspecies_name": "Enterobacter xiangfangensis subsp. steigerwaltii"
      },
      {
        "aligned_fraction_query_percent": 79.88,
        "aligned_fraction_reference_percent": 83.61,
        "ani_percent": 95.52,
        "lineage_id": "",
        "minimum_directional_af_percent": 79.88,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_051091715.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS010",
        "subspecies_name": "Enterobacter xiangfangensis subsp. xiangfangensis"
      },
      {
        "aligned_fraction_query_percent": 80.08,
        "aligned_fraction_reference_percent": 82.60,
        "ani_percent": 95.51,
        "lineage_id": "",
        "minimum_directional_af_percent": 80.08,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_030411255.2",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS009",
        "subspecies_name": "Enterobacter xiangfangensis subsp. steigerwaltii"
      },
      {
        "aligned_fraction_query_percent": 77.98,
        "aligned_fraction_reference_percent": 85.04,
        "ani_percent": 95.49,
        "lineage_id": "",
        "minimum_directional_af_percent": 77.98,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_001729725.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS009",
        "subspecies_name": "Enterobacter xiangfangensis subsp. steigerwaltii"
      },
      {
        "aligned_fraction_query_percent": 77.28,
        "aligned_fraction_reference_percent": 82.75,
        "ani_percent": 95.48,
        "lineage_id": "",
        "minimum_directional_af_percent": 77.28,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_054871305.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS009",
        "subspecies_name": "Enterobacter xiangfangensis subsp. steigerwaltii"
      },
      {
        "aligned_fraction_query_percent": 81.37,
        "aligned_fraction_reference_percent": 81.15,
        "ani_percent": 95.40,
        "lineage_id": "",
        "minimum_directional_af_percent": 81.15,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_043965205.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS009",
        "subspecies_name": "Enterobacter xiangfangensis subsp. steigerwaltii"
      },
      {
        "aligned_fraction_query_percent": 79.31,
        "aligned_fraction_reference_percent": 77.13,
        "ani_percent": 95.40,
        "lineage_id": "",
        "minimum_directional_af_percent": 77.13,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_046097115.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS009",
        "subspecies_name": "Enterobacter xiangfangensis subsp. steigerwaltii"
      },
      {
        "aligned_fraction_query_percent": 78.82,
        "aligned_fraction_reference_percent": 79.26,
        "ani_percent": 95.39,
        "lineage_id": "",
        "minimum_directional_af_percent": 78.82,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_050871265.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS009",
        "subspecies_name": "Enterobacter xiangfangensis subsp. steigerwaltii"
      },
      {
        "aligned_fraction_query_percent": 78.47,
        "aligned_fraction_reference_percent": 83.41,
        "ani_percent": 95.35,
        "lineage_id": "",
        "minimum_directional_af_percent": 78.47,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_030848125.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS010",
        "subspecies_name": "Enterobacter xiangfangensis subsp. xiangfangensis"
      },
      {
        "aligned_fraction_query_percent": 78.80,
        "aligned_fraction_reference_percent": 79.90,
        "ani_percent": 95.33,
        "lineage_id": "",
        "minimum_directional_af_percent": 78.80,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_036936505.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "ECTX-SS010",
        "subspecies_name": "Enterobacter xiangfangensis subsp. xiangfangensis"
      },
      {
        "aligned_fraction_query_percent": 76.35,
        "aligned_fraction_reference_percent": 81.08,
        "ani_percent": 94.98,
        "lineage_id": "",
        "minimum_directional_af_percent": 76.35,
        "name_status": "validly_published_synonym",
        "reference_id": "primary_whole:GCA_039734725.2",
        "reference_role": "diversity",
        "species_id": "ECTX-SP025",
        "species_name": "Enterobacter xiangfangensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 75.90,
        "aligned_fraction_reference_percent": 80.52,
        "ani_percent": 94.32,
        "lineage_id": "",
        "minimum_directional_af_percent": 75.90,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_019048245.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP009",
        "species_name": "Enterobacter hormaechei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 75.74,
        "aligned_fraction_reference_percent": 78.51,
        "ani_percent": 94.32,
        "lineage_id": "",
        "minimum_directional_af_percent": 75.74,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_045037665.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP009",
        "species_name": "Enterobacter hormaechei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 75.92,
        "aligned_fraction_reference_percent": 83.49,
        "ani_percent": 94.20,
        "lineage_id": "",
        "minimum_directional_af_percent": 75.92,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_043973395.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP009",
        "species_name": "Enterobacter hormaechei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 74.92,
        "aligned_fraction_reference_percent": 85.93,
        "ani_percent": 94.19,
        "lineage_id": "",
        "minimum_directional_af_percent": 74.92,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_031852185.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP009",
        "species_name": "Enterobacter hormaechei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 73.98,
        "aligned_fraction_reference_percent": 79.28,
        "ani_percent": 94.09,
        "lineage_id": "",
        "minimum_directional_af_percent": 73.98,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_053349035.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP009",
        "species_name": "Enterobacter hormaechei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 73.61,
        "aligned_fraction_reference_percent": 84.30,
        "ani_percent": 93.76,
        "lineage_id": "",
        "minimum_directional_af_percent": 73.61,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_004331385.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP018",
        "species_name": "Enterobacter quasihormaechei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 69.25,
        "aligned_fraction_reference_percent": 71.35,
        "ani_percent": 91.50,
        "lineage_id": "",
        "minimum_directional_af_percent": 69.25,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_013376835.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP016",
        "species_name": "Enterobacter pasteurii",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 68.46,
        "aligned_fraction_reference_percent": 74.14,
        "ani_percent": 91.45,
        "lineage_id": "",
        "minimum_directional_af_percent": 68.46,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_028890245.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP016",
        "species_name": "Enterobacter pasteurii",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 55.37,
        "aligned_fraction_reference_percent": 60.75,
        "ani_percent": 89.67,
        "lineage_id": "",
        "minimum_directional_af_percent": 55.37,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_031218175.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP003",
        "species_name": "Enterobacter bugandensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 55.25,
        "aligned_fraction_reference_percent": 60.65,
        "ani_percent": 89.54,
        "lineage_id": "",
        "minimum_directional_af_percent": 55.25,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_004804395.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP003",
        "species_name": "Enterobacter bugandensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 55.69,
        "aligned_fraction_reference_percent": 59.83,
        "ani_percent": 89.51,
        "lineage_id": "",
        "minimum_directional_af_percent": 55.69,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_053165385.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP003",
        "species_name": "Enterobacter bugandensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 55.70,
        "aligned_fraction_reference_percent": 60.62,
        "ani_percent": 89.48,
        "lineage_id": "",
        "minimum_directional_af_percent": 55.70,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_045348695.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP007",
        "species_name": "Enterobacter chuandaensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 55.97,
        "aligned_fraction_reference_percent": 61.35,
        "ani_percent": 89.46,
        "lineage_id": "",
        "minimum_directional_af_percent": 55.97,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_043967505.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP003",
        "species_name": "Enterobacter bugandensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 55.62,
        "aligned_fraction_reference_percent": 57.58,
        "ani_percent": 89.43,
        "lineage_id": "",
        "minimum_directional_af_percent": 55.62,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_019046905.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP003",
        "species_name": "Enterobacter bugandensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 53.36,
        "aligned_fraction_reference_percent": 56.57,
        "ani_percent": 89.41,
        "lineage_id": "",
        "minimum_directional_af_percent": 53.36,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_039718975.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP007",
        "species_name": "Enterobacter chuandaensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 54.22,
        "aligned_fraction_reference_percent": 54.67,
        "ani_percent": 89.37,
        "lineage_id": "",
        "minimum_directional_af_percent": 54.22,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_045278925.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP007",
        "species_name": "Enterobacter chuandaensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 55.64,
        "aligned_fraction_reference_percent": 59.69,
        "ani_percent": 89.35,
        "lineage_id": "",
        "minimum_directional_af_percent": 55.64,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_054382355.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP003",
        "species_name": "Enterobacter bugandensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 54.78,
        "aligned_fraction_reference_percent": 60.84,
        "ani_percent": 89.33,
        "lineage_id": "",
        "minimum_directional_af_percent": 54.78,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_043970685.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP003",
        "species_name": "Enterobacter bugandensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 52.52,
        "aligned_fraction_reference_percent": 55.44,
        "ani_percent": 89.29,
        "lineage_id": "",
        "minimum_directional_af_percent": 52.52,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_030410235.2",
        "reference_role": "diversity",
        "species_id": "ECTX-SP019",
        "species_name": "Enterobacter roggenkampii",
        "subspecies_id": "ECTX-SS006",
        "subspecies_name": "Enterobacter roggenkampii subsp. roggenkampii"
      },
      {
        "aligned_fraction_query_percent": 55.29,
        "aligned_fraction_reference_percent": 59.83,
        "ani_percent": 89.26,
        "lineage_id": "",
        "minimum_directional_af_percent": 55.29,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_043966825.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP003",
        "species_name": "Enterobacter bugandensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 54.31,
        "aligned_fraction_reference_percent": 60.15,
        "ani_percent": 89.17,
        "lineage_id": "",
        "minimum_directional_af_percent": 54.31,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_026344075.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP014",
        "species_name": "Enterobacter nematophilus",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 57.10,
        "aligned_fraction_reference_percent": 60.96,
        "ani_percent": 89.14,
        "lineage_id": "",
        "minimum_directional_af_percent": 57.10,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_977007405.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP013",
        "species_name": "Enterobacter mori",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 56.48,
        "aligned_fraction_reference_percent": 60.81,
        "ani_percent": 89.05,
        "lineage_id": "",
        "minimum_directional_af_percent": 56.48,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_022014715.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP013",
        "species_name": "Enterobacter mori",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 51.19,
        "aligned_fraction_reference_percent": 55.55,
        "ani_percent": 89.01,
        "lineage_id": "",
        "minimum_directional_af_percent": 51.19,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_001521715.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP002",
        "species_name": "Enterobacter asburiae",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 54.29,
        "aligned_fraction_reference_percent": 57.32,
        "ani_percent": 89.01,
        "lineage_id": "",
        "minimum_directional_af_percent": 54.29,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_014490825.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP019",
        "species_name": "Enterobacter roggenkampii",
        "subspecies_id": "ECTX-SS006",
        "subspecies_name": "Enterobacter roggenkampii subsp. roggenkampii"
      },
      {
        "aligned_fraction_query_percent": 54.24,
        "aligned_fraction_reference_percent": 60.08,
        "ani_percent": 89.00,
        "lineage_id": "",
        "minimum_directional_af_percent": 54.24,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_003964905.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP013",
        "species_name": "Enterobacter mori",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 50.57,
        "aligned_fraction_reference_percent": 57.00,
        "ani_percent": 88.98,
        "lineage_id": "",
        "minimum_directional_af_percent": 50.57,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_013784425.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP002",
        "species_name": "Enterobacter asburiae",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 52.83,
        "aligned_fraction_reference_percent": 59.47,
        "ani_percent": 88.97,
        "lineage_id": "",
        "minimum_directional_af_percent": 52.83,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_003594915.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP007",
        "species_name": "Enterobacter chuandaensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 53.30,
        "aligned_fraction_reference_percent": 55.74,
        "ani_percent": 88.96,
        "lineage_id": "",
        "minimum_directional_af_percent": 53.30,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_014490845.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP019",
        "species_name": "Enterobacter roggenkampii",
        "subspecies_id": "ECTX-SS006",
        "subspecies_name": "Enterobacter roggenkampii subsp. roggenkampii"
      },
      {
        "aligned_fraction_query_percent": 53.34,
        "aligned_fraction_reference_percent": 55.19,
        "ani_percent": 88.96,
        "lineage_id": "",
        "minimum_directional_af_percent": 53.34,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_047116295.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP019",
        "species_name": "Enterobacter roggenkampii",
        "subspecies_id": "ECTX-SS006",
        "subspecies_name": "Enterobacter roggenkampii subsp. roggenkampii"
      },
      {
        "aligned_fraction_query_percent": 55.76,
        "aligned_fraction_reference_percent": 56.70,
        "ani_percent": 88.95,
        "lineage_id": "",
        "minimum_directional_af_percent": 55.76,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_054382275.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP013",
        "species_name": "Enterobacter mori",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 55.76,
        "aligned_fraction_reference_percent": 60.75,
        "ani_percent": 88.94,
        "lineage_id": "",
        "minimum_directional_af_percent": 55.76,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_025244905.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP013",
        "species_name": "Enterobacter mori",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 52.97,
        "aligned_fraction_reference_percent": 52.17,
        "ani_percent": 88.91,
        "lineage_id": "",
        "minimum_directional_af_percent": 52.17,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_052569525.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP002",
        "species_name": "Enterobacter asburiae",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 50.82,
        "aligned_fraction_reference_percent": 53.49,
        "ani_percent": 88.86,
        "lineage_id": "",
        "minimum_directional_af_percent": 50.82,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_009184765.2",
        "reference_role": "diversity",
        "species_id": "ECTX-SP019",
        "species_name": "Enterobacter roggenkampii",
        "subspecies_id": "ECTX-SS006",
        "subspecies_name": "Enterobacter roggenkampii subsp. roggenkampii"
      },
      {
        "aligned_fraction_query_percent": 55.14,
        "aligned_fraction_reference_percent": 60.32,
        "ani_percent": 88.85,
        "lineage_id": "",
        "minimum_directional_af_percent": 55.14,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_051517475.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP013",
        "species_name": "Enterobacter mori",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 52.25,
        "aligned_fraction_reference_percent": 55.61,
        "ani_percent": 88.84,
        "lineage_id": "",
        "minimum_directional_af_percent": 52.25,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_001729805.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP019",
        "species_name": "Enterobacter roggenkampii",
        "subspecies_id": "ECTX-SS006",
        "subspecies_name": "Enterobacter roggenkampii subsp. roggenkampii"
      },
      {
        "aligned_fraction_query_percent": 54.07,
        "aligned_fraction_reference_percent": 59.19,
        "ani_percent": 88.81,
        "lineage_id": "",
        "minimum_directional_af_percent": 54.07,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_031851495.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP002",
        "species_name": "Enterobacter asburiae",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 55.34,
        "aligned_fraction_reference_percent": 58.50,
        "ani_percent": 88.78,
        "lineage_id": "",
        "minimum_directional_af_percent": 55.34,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_043973405.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP013",
        "species_name": "Enterobacter mori",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 50.03,
        "aligned_fraction_reference_percent": 57.28,
        "ani_percent": 88.77,
        "lineage_id": "",
        "minimum_directional_af_percent": 50.03,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_008364625.2",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP002",
        "species_name": "Enterobacter asburiae",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 52.21,
        "aligned_fraction_reference_percent": 56.61,
        "ani_percent": 88.74,
        "lineage_id": "",
        "minimum_directional_af_percent": 52.21,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_021347605.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP019",
        "species_name": "Enterobacter roggenkampii",
        "subspecies_id": "ECTX-SS006",
        "subspecies_name": "Enterobacter roggenkampii subsp. roggenkampii"
      },
      {
        "aligned_fraction_query_percent": 52.86,
        "aligned_fraction_reference_percent": 56.44,
        "ani_percent": 88.72,
        "lineage_id": "",
        "minimum_directional_af_percent": 52.86,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_052974775.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP019",
        "species_name": "Enterobacter roggenkampii",
        "subspecies_id": "ECTX-SS006",
        "subspecies_name": "Enterobacter roggenkampii subsp. roggenkampii"
      },
      {
        "aligned_fraction_query_percent": 51.19,
        "aligned_fraction_reference_percent": 52.78,
        "ani_percent": 88.70,
        "lineage_id": "",
        "minimum_directional_af_percent": 51.19,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_045866555.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP017",
        "species_name": "Enterobacter pseudoroggenkampii",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 49.81,
        "aligned_fraction_reference_percent": 55.42,
        "ani_percent": 88.63,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.81,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_004006055.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP023",
        "species_name": "Enterobacter vonholyi",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 51.68,
        "aligned_fraction_reference_percent": 49.26,
        "ani_percent": 88.63,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.26,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_019968825.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP019",
        "species_name": "Enterobacter roggenkampii",
        "subspecies_id": "ECTX-SS005",
        "subspecies_name": "Enterobacter roggenkampii subsp. quasiroggenkampii"
      },
      {
        "aligned_fraction_query_percent": 50.14,
        "aligned_fraction_reference_percent": 58.41,
        "ani_percent": 88.62,
        "lineage_id": "",
        "minimum_directional_af_percent": 50.14,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_009176645.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP015",
        "species_name": "Enterobacter oligotrophicus",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 49.88,
        "aligned_fraction_reference_percent": 54.99,
        "ani_percent": 88.60,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.88,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_030406165.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP017",
        "species_name": "Enterobacter pseudoroggenkampii",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 52.69,
        "aligned_fraction_reference_percent": 53.75,
        "ani_percent": 88.59,
        "lineage_id": "",
        "minimum_directional_af_percent": 52.69,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_025999975.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP002",
        "species_name": "Enterobacter asburiae",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 52.03,
        "aligned_fraction_reference_percent": 54.53,
        "ani_percent": 88.59,
        "lineage_id": "",
        "minimum_directional_af_percent": 52.03,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_053699365.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP011",
        "species_name": "Enterobacter kobei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 50.28,
        "aligned_fraction_reference_percent": 58.68,
        "ani_percent": 88.58,
        "lineage_id": "",
        "minimum_directional_af_percent": 50.28,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_040834095.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP023",
        "species_name": "Enterobacter vonholyi",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 49.82,
        "aligned_fraction_reference_percent": 52.73,
        "ani_percent": 88.56,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.82,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_001729765.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP011",
        "species_name": "Enterobacter kobei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 51.82,
        "aligned_fraction_reference_percent": 54.79,
        "ani_percent": 88.56,
        "lineage_id": "",
        "minimum_directional_af_percent": 51.82,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_050847275.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP024",
        "species_name": "Enterobacter wuhouensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 51.77,
        "aligned_fraction_reference_percent": 50.31,
        "ani_percent": 88.55,
        "lineage_id": "",
        "minimum_directional_af_percent": 50.31,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_008931545.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP011",
        "species_name": "Enterobacter kobei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 50.27,
        "aligned_fraction_reference_percent": 50.24,
        "ani_percent": 88.54,
        "lineage_id": "",
        "minimum_directional_af_percent": 50.24,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_001984825.2",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP005",
        "species_name": "Enterobacter chengduensis",
        "subspecies_id": "ECTX-SS001",
        "subspecies_name": "Enterobacter chengduensis subsp. chengduensis"
      },
      {
        "aligned_fraction_query_percent": 51.02,
        "aligned_fraction_reference_percent": 56.29,
        "ani_percent": 88.54,
        "lineage_id": "",
        "minimum_directional_af_percent": 51.02,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_043972695.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP019",
        "species_name": "Enterobacter roggenkampii",
        "subspecies_id": "ECTX-SS005",
        "subspecies_name": "Enterobacter roggenkampii subsp. quasiroggenkampii"
      },
      {
        "aligned_fraction_query_percent": 49.50,
        "aligned_fraction_reference_percent": 54.75,
        "ani_percent": 88.54,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.50,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_045278755.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP011",
        "species_name": "Enterobacter kobei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 51.80,
        "aligned_fraction_reference_percent": 56.11,
        "ani_percent": 88.53,
        "lineage_id": "",
        "minimum_directional_af_percent": 51.80,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_030406125.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP017",
        "species_name": "Enterobacter pseudoroggenkampii",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 52.44,
        "aligned_fraction_reference_percent": 56.72,
        "ani_percent": 88.53,
        "lineage_id": "",
        "minimum_directional_af_percent": 52.44,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_035835995.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP024",
        "species_name": "Enterobacter wuhouensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 51.06,
        "aligned_fraction_reference_percent": 56.50,
        "ani_percent": 88.52,
        "lineage_id": "",
        "minimum_directional_af_percent": 51.06,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_029542725.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP019",
        "species_name": "Enterobacter roggenkampii",
        "subspecies_id": "ECTX-SS005",
        "subspecies_name": "Enterobacter roggenkampii subsp. quasiroggenkampii"
      },
      {
        "aligned_fraction_query_percent": 50.90,
        "aligned_fraction_reference_percent": 57.83,
        "ani_percent": 88.51,
        "lineage_id": "",
        "minimum_directional_af_percent": 50.90,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_004355165.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP023",
        "species_name": "Enterobacter vonholyi",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 51.32,
        "aligned_fraction_reference_percent": 56.88,
        "ani_percent": 88.51,
        "lineage_id": "",
        "minimum_directional_af_percent": 51.32,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_040059225.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP019",
        "species_name": "Enterobacter roggenkampii",
        "subspecies_id": "ECTX-SS005",
        "subspecies_name": "Enterobacter roggenkampii subsp. quasiroggenkampii"
      },
      {
        "aligned_fraction_query_percent": 51.36,
        "aligned_fraction_reference_percent": 52.64,
        "ani_percent": 88.51,
        "lineage_id": "",
        "minimum_directional_af_percent": 51.36,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_043971375.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP005",
        "species_name": "Enterobacter chengduensis",
        "subspecies_id": "ECTX-SS001",
        "subspecies_name": "Enterobacter chengduensis subsp. chengduensis"
      },
      {
        "aligned_fraction_query_percent": 50.14,
        "aligned_fraction_reference_percent": 54.40,
        "ani_percent": 88.50,
        "lineage_id": "",
        "minimum_directional_af_percent": 50.14,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_001039365.2",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP019",
        "species_name": "Enterobacter roggenkampii",
        "subspecies_id": "ECTX-SS005",
        "subspecies_name": "Enterobacter roggenkampii subsp. quasiroggenkampii"
      },
      {
        "aligned_fraction_query_percent": 50.97,
        "aligned_fraction_reference_percent": 55.24,
        "ani_percent": 88.49,
        "lineage_id": "",
        "minimum_directional_af_percent": 50.97,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_007035975.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP023",
        "species_name": "Enterobacter vonholyi",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 53.51,
        "aligned_fraction_reference_percent": 55.39,
        "ani_percent": 88.48,
        "lineage_id": "",
        "minimum_directional_af_percent": 53.51,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_003594935.2",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP010",
        "species_name": "Enterobacter huaxiensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 52.63,
        "aligned_fraction_reference_percent": 56.26,
        "ani_percent": 88.48,
        "lineage_id": "",
        "minimum_directional_af_percent": 52.63,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_035556915.2",
        "reference_role": "diversity",
        "species_id": "ECTX-SP002",
        "species_name": "Enterobacter asburiae",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 51.20,
        "aligned_fraction_reference_percent": 51.68,
        "ani_percent": 88.47,
        "lineage_id": "",
        "minimum_directional_af_percent": 51.20,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_003665375.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP011",
        "species_name": "Enterobacter kobei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 49.62,
        "aligned_fraction_reference_percent": 51.55,
        "ani_percent": 88.47,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.62,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_019968805.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP023",
        "species_name": "Enterobacter vonholyi",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 52.83,
        "aligned_fraction_reference_percent": 55.55,
        "ani_percent": 88.46,
        "lineage_id": "",
        "minimum_directional_af_percent": 52.83,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_000211415.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP013",
        "species_name": "Enterobacter mori",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 49.80,
        "aligned_fraction_reference_percent": 52.53,
        "ani_percent": 88.46,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.80,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_053698735.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP011",
        "species_name": "Enterobacter kobei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 51.49,
        "aligned_fraction_reference_percent": 54.75,
        "ani_percent": 88.45,
        "lineage_id": "",
        "minimum_directional_af_percent": 51.49,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_034331165.2",
        "reference_role": "diversity",
        "species_id": "ECTX-SP002",
        "species_name": "Enterobacter asburiae",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 51.01,
        "aligned_fraction_reference_percent": 54.36,
        "ani_percent": 88.43,
        "lineage_id": "",
        "minimum_directional_af_percent": 51.01,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_004331265.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP024",
        "species_name": "Enterobacter wuhouensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 50.84,
        "aligned_fraction_reference_percent": 49.09,
        "ani_percent": 88.43,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.09,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_015137465.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP011",
        "species_name": "Enterobacter kobei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 50.41,
        "aligned_fraction_reference_percent": 48.57,
        "ani_percent": 88.41,
        "lineage_id": "",
        "minimum_directional_af_percent": 48.57,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_015135855.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP011",
        "species_name": "Enterobacter kobei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 50.54,
        "aligned_fraction_reference_percent": 53.29,
        "ani_percent": 88.41,
        "lineage_id": "",
        "minimum_directional_af_percent": 50.54,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_034008275.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP005",
        "species_name": "Enterobacter chengduensis",
        "subspecies_id": "ECTX-SS002",
        "subspecies_name": "Enterobacter chengduensis subsp. rongchengensis"
      },
      {
        "aligned_fraction_query_percent": 51.28,
        "aligned_fraction_reference_percent": 55.41,
        "ani_percent": 88.39,
        "lineage_id": "",
        "minimum_directional_af_percent": 51.28,
        "name_status": "approved_project_subspecies_proposal_not_validated_combination",
        "reference_id": "primary_whole:GCA_002952735.2",
        "reference_role": "diversity",
        "species_id": "ECTX-SP019",
        "species_name": "Enterobacter roggenkampii",
        "subspecies_id": "ECTX-SS005",
        "subspecies_name": "Enterobacter roggenkampii subsp. quasiroggenkampii"
      },
      {
        "aligned_fraction_query_percent": 51.03,
        "aligned_fraction_reference_percent": 54.70,
        "ani_percent": 88.38,
        "lineage_id": "",
        "minimum_directional_af_percent": 51.03,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_026420145.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP017",
        "species_name": "Enterobacter pseudoroggenkampii",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 49.73,
        "aligned_fraction_reference_percent": 56.24,
        "ani_percent": 88.37,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.73,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_028735835.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP023",
        "species_name": "Enterobacter vonholyi",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 47.26,
        "aligned_fraction_reference_percent": 50.41,
        "ani_percent": 88.34,
        "lineage_id": "",
        "minimum_directional_af_percent": 47.26,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_002939185.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP021",
        "species_name": "Enterobacter sichuanensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 52.53,
        "aligned_fraction_reference_percent": 48.93,
        "ani_percent": 88.33,
        "lineage_id": "",
        "minimum_directional_af_percent": 48.93,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_000025565.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP008",
        "species_name": "Enterobacter cloacae",
        "subspecies_id": "ECTX-SS003",
        "subspecies_name": "Enterobacter cloacae subsp. cloacae"
      },
      {
        "aligned_fraction_query_percent": 49.60,
        "aligned_fraction_reference_percent": 56.35,
        "ani_percent": 88.27,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.60,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_008364555.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP023",
        "species_name": "Enterobacter vonholyi",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 48.59,
        "aligned_fraction_reference_percent": 50.58,
        "ani_percent": 88.26,
        "lineage_id": "",
        "minimum_directional_af_percent": 48.59,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_043964395.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP021",
        "species_name": "Enterobacter sichuanensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 51.29,
        "aligned_fraction_reference_percent": 48.38,
        "ani_percent": 88.23,
        "lineage_id": "",
        "minimum_directional_af_percent": 48.38,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_053691555.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP008",
        "species_name": "Enterobacter cloacae",
        "subspecies_id": "ECTX-SS003",
        "subspecies_name": "Enterobacter cloacae subsp. cloacae"
      },
      {
        "aligned_fraction_query_percent": 48.02,
        "aligned_fraction_reference_percent": 50.74,
        "ani_percent": 88.14,
        "lineage_id": "",
        "minimum_directional_af_percent": 48.02,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_042434935.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP021",
        "species_name": "Enterobacter sichuanensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 47.35,
        "aligned_fraction_reference_percent": 52.41,
        "ani_percent": 88.12,
        "lineage_id": "",
        "minimum_directional_af_percent": 47.35,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_009036245.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP021",
        "species_name": "Enterobacter sichuanensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 49.60,
        "aligned_fraction_reference_percent": 52.59,
        "ani_percent": 88.02,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.60,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_020540925.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP008",
        "species_name": "Enterobacter cloacae",
        "subspecies_id": "ECTX-SS003",
        "subspecies_name": "Enterobacter cloacae subsp. cloacae"
      },
      {
        "aligned_fraction_query_percent": 50.26,
        "aligned_fraction_reference_percent": 53.44,
        "ani_percent": 88.01,
        "lineage_id": "",
        "minimum_directional_af_percent": 50.26,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_046015535.2",
        "reference_role": "diversity",
        "species_id": "ECTX-SP008",
        "species_name": "Enterobacter cloacae",
        "subspecies_id": "ECTX-SS003",
        "subspecies_name": "Enterobacter cloacae subsp. cloacae"
      },
      {
        "aligned_fraction_query_percent": 50.14,
        "aligned_fraction_reference_percent": 49.78,
        "ani_percent": 88.00,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.78,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_043972705.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP008",
        "species_name": "Enterobacter cloacae",
        "subspecies_id": "ECTX-SS004",
        "subspecies_name": "Enterobacter cloacae subsp. dissolvens"
      },
      {
        "aligned_fraction_query_percent": 49.10,
        "aligned_fraction_reference_percent": 52.85,
        "ani_percent": 87.99,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.10,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_034008295.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP006",
        "species_name": "Enterobacter chinensis",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 49.47,
        "aligned_fraction_reference_percent": 52.10,
        "ani_percent": 87.97,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.47,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_024599795.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP008",
        "species_name": "Enterobacter cloacae",
        "subspecies_id": "ECTX-SS004",
        "subspecies_name": "Enterobacter cloacae subsp. dissolvens"
      },
      {
        "aligned_fraction_query_percent": 49.51,
        "aligned_fraction_reference_percent": 51.97,
        "ani_percent": 87.95,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.51,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_000235765.3",
        "reference_role": "diversity",
        "species_id": "ECTX-SP008",
        "species_name": "Enterobacter cloacae",
        "subspecies_id": "ECTX-SS004",
        "subspecies_name": "Enterobacter cloacae subsp. dissolvens"
      },
      {
        "aligned_fraction_query_percent": 49.24,
        "aligned_fraction_reference_percent": 53.07,
        "ani_percent": 87.91,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.24,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_009660455.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP008",
        "species_name": "Enterobacter cloacae",
        "subspecies_id": "ECTX-SS004",
        "subspecies_name": "Enterobacter cloacae subsp. dissolvens"
      },
      {
        "aligned_fraction_query_percent": 49.01,
        "aligned_fraction_reference_percent": 53.24,
        "ani_percent": 87.90,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.01,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_040892575.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP008",
        "species_name": "Enterobacter cloacae",
        "subspecies_id": "ECTX-SS003",
        "subspecies_name": "Enterobacter cloacae subsp. cloacae"
      },
      {
        "aligned_fraction_query_percent": 49.58,
        "aligned_fraction_reference_percent": 53.26,
        "ani_percent": 87.89,
        "lineage_id": "",
        "minimum_directional_af_percent": 49.58,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_031851625.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP008",
        "species_name": "Enterobacter cloacae",
        "subspecies_id": "ECTX-SS003",
        "subspecies_name": "Enterobacter cloacae subsp. cloacae"
      },
      {
        "aligned_fraction_query_percent": 50.18,
        "aligned_fraction_reference_percent": 52.28,
        "ani_percent": 87.87,
        "lineage_id": "",
        "minimum_directional_af_percent": 50.18,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_016864115.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP008",
        "species_name": "Enterobacter cloacae",
        "subspecies_id": "ECTX-SS004",
        "subspecies_name": "Enterobacter cloacae subsp. dissolvens"
      },
      {
        "aligned_fraction_query_percent": 50.35,
        "aligned_fraction_reference_percent": 51.61,
        "ani_percent": 87.85,
        "lineage_id": "",
        "minimum_directional_af_percent": 50.35,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_002303275.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP008",
        "species_name": "Enterobacter cloacae",
        "subspecies_id": "ECTX-SS003",
        "subspecies_name": "Enterobacter cloacae subsp. cloacae"
      },
      {
        "aligned_fraction_query_percent": 51.45,
        "aligned_fraction_reference_percent": 53.41,
        "ani_percent": 87.84,
        "lineage_id": "",
        "minimum_directional_af_percent": 51.45,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_905331265.2",
        "reference_role": "diversity",
        "species_id": "ECTX-SP008",
        "species_name": "Enterobacter cloacae",
        "subspecies_id": "ECTX-SS003",
        "subspecies_name": "Enterobacter cloacae subsp. cloacae"
      },
      {
        "aligned_fraction_query_percent": 43.41,
        "aligned_fraction_reference_percent": 46.82,
        "ani_percent": 87.77,
        "lineage_id": "",
        "minimum_directional_af_percent": 43.41,
        "name_status": "provisional_name_not_validly_published",
        "reference_id": "primary_whole:GCA_023023105.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP001",
        "species_name": "Enterobacter adelaidei",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 47.09,
        "aligned_fraction_reference_percent": 50.52,
        "ani_percent": 87.67,
        "lineage_id": "",
        "minimum_directional_af_percent": 47.09,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_043647335.2",
        "reference_role": "diversity",
        "species_id": "ECTX-SP012",
        "species_name": "Enterobacter ludwigii",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 46.35,
        "aligned_fraction_reference_percent": 48.83,
        "ani_percent": 87.58,
        "lineage_id": "",
        "minimum_directional_af_percent": 46.35,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_035323105.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP012",
        "species_name": "Enterobacter ludwigii",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 45.84,
        "aligned_fraction_reference_percent": 49.58,
        "ani_percent": 87.55,
        "lineage_id": "",
        "minimum_directional_af_percent": 45.84,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_019047785.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP004",
        "species_name": "Enterobacter cancerogenus",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 46.99,
        "aligned_fraction_reference_percent": 49.17,
        "ani_percent": 87.54,
        "lineage_id": "",
        "minimum_directional_af_percent": 46.99,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_050626905.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP012",
        "species_name": "Enterobacter ludwigii",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 46.59,
        "aligned_fraction_reference_percent": 49.06,
        "ani_percent": 87.52,
        "lineage_id": "",
        "minimum_directional_af_percent": 46.59,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_001750725.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP012",
        "species_name": "Enterobacter ludwigii",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 44.30,
        "aligned_fraction_reference_percent": 48.16,
        "ani_percent": 87.47,
        "lineage_id": "",
        "minimum_directional_af_percent": 44.30,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_002850575.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP004",
        "species_name": "Enterobacter cancerogenus",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 46.34,
        "aligned_fraction_reference_percent": 48.36,
        "ani_percent": 87.47,
        "lineage_id": "",
        "minimum_directional_af_percent": 46.34,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_031851515.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP012",
        "species_name": "Enterobacter ludwigii",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 45.96,
        "aligned_fraction_reference_percent": 51.13,
        "ani_percent": 87.41,
        "lineage_id": "",
        "minimum_directional_af_percent": 45.96,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_029718255.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP012",
        "species_name": "Enterobacter ludwigii",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 45.84,
        "aligned_fraction_reference_percent": 49.29,
        "ani_percent": 87.34,
        "lineage_id": "",
        "minimum_directional_af_percent": 45.84,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_003071645.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP012",
        "species_name": "Enterobacter ludwigii",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 46.83,
        "aligned_fraction_reference_percent": 49.78,
        "ani_percent": 87.34,
        "lineage_id": "",
        "minimum_directional_af_percent": 46.83,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_029721015.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP012",
        "species_name": "Enterobacter ludwigii",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 44.35,
        "aligned_fraction_reference_percent": 46.87,
        "ani_percent": 87.27,
        "lineage_id": "",
        "minimum_directional_af_percent": 44.35,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_904425455.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP004",
        "species_name": "Enterobacter cancerogenus",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 40.54,
        "aligned_fraction_reference_percent": 43.22,
        "ani_percent": 86.90,
        "lineage_id": "",
        "minimum_directional_af_percent": 40.54,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_025152625.1",
        "reference_role": "diversity",
        "species_id": "ECTX-SP022",
        "species_name": "Enterobacter soli",
        "subspecies_id": "",
        "subspecies_name": ""
      },
      {
        "aligned_fraction_query_percent": 40.65,
        "aligned_fraction_reference_percent": 42.75,
        "ani_percent": 86.27,
        "lineage_id": "",
        "minimum_directional_af_percent": 40.65,
        "name_status": "validly_published_correct_name",
        "reference_id": "primary_whole:GCA_001654845.1",
        "reference_role": "type_anchor",
        "species_id": "ECTX-SP022",
        "species_name": "Enterobacter soli",
        "subspecies_id": "",
        "subspecies_name": ""
      }
    ],
    "raw_hit_count": 140,
    "record_type": "development_evidence_only",
    "reference_count": 140,
    "schema_version": "2.0.0-dev-evidence",
    "unique_hit_count": 140,
    "units": {
      "aligned_fraction": "percent",
      "ani": "percent"
    }
  },
  "execution": {
    "stage": "genomovar",
    "status": "complete"
  },
  "external_problem_warnings": [],
  "genomovar": {
    "approval": {
      "accepted_addendum_sha256": "1616c88a4be5193b8e54b6ce3ec27fcee19d731dd375c2e7ad4c989db429df4f",
      "base_contract_sha256": "ae3eacf1a708a4c0fac18d81dc46df73c183d84accad4dd52e1c4a43de7e1b03",
      "by": "Michael",
      "date": "2026-10-08",
      "decision": "Q-GV-AF-01 option A",
      "source": "https://github.com/mbhall88/Enterobacter/issues/3#issuecomment-6056920803",
      "status": "approved"
    },
    "compatible_groups": [
      "ECTX-GV-2026-10-02-v1-GV10"
    ],
    "definition": {
      "group_count": 25,
      "member_count": 173,
      "membership_sha256": "1a2202dde4e0afcf78a89c1e6c084563169bd5cdea0f102da8113b1a87ebf0ab",
      "version": "2026-10-02-v1"
    },
    "genomovar_id": "ECTX-GV-2026-10-02-v1-GV10",
    "groups": [
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_000750225.1",
          "genomovar_chromosome:GCA_000750275.1",
          "genomovar_chromosome:GCA_000784905.1",
          "genomovar_chromosome:GCA_014117285.1",
          "genomovar_chromosome:GCA_016864035.1",
          "genomovar_chromosome:GCA_021869625.1",
          "genomovar_chromosome:GCA_021869665.1",
          "genomovar_chromosome:GCA_038069265.2",
          "genomovar_chromosome:GCA_041005825.1",
          "genomovar_chromosome:GCA_048388455.1",
          "genomovar_chromosome:GCA_050162345.1",
          "genomovar_chromosome:GCA_050245065.1",
          "genomovar_chromosome:GCA_050871245.1",
          "genomovar_chromosome:GCA_051092825.1",
          "genomovar_chromosome:GCA_051093565.1",
          "genomovar_chromosome:GCA_052713485.2",
          "genomovar_chromosome:GCA_052922205.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV01",
        "minimum_af_query_percent": 83.64,
        "minimum_af_reference_percent": 90.09,
        "minimum_ani_percent": 98.80,
        "missing": [],
        "observed": 17,
        "required": 17,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_001729745.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV02",
        "minimum_af_query_percent": 82.43,
        "minimum_af_reference_percent": 94.54,
        "minimum_ani_percent": 99.08,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_002201815.1",
          "genomovar_chromosome:GCA_003031445.1",
          "genomovar_chromosome:GCA_009834325.1",
          "genomovar_chromosome:GCA_010319625.1",
          "genomovar_chromosome:GCA_013625795.1",
          "genomovar_chromosome:GCA_017161605.1",
          "genomovar_chromosome:GCA_017161725.1",
          "genomovar_chromosome:GCA_017161745.1",
          "genomovar_chromosome:GCA_017161765.1",
          "genomovar_chromosome:GCA_017161785.1",
          "genomovar_chromosome:GCA_017161805.1",
          "genomovar_chromosome:GCA_017161825.1",
          "genomovar_chromosome:GCA_017161845.1",
          "genomovar_chromosome:GCA_017161865.1",
          "genomovar_chromosome:GCA_021397695.1",
          "genomovar_chromosome:GCA_021398115.1",
          "genomovar_chromosome:GCA_021725435.1",
          "genomovar_chromosome:GCA_023734795.1",
          "genomovar_chromosome:GCA_023734815.1",
          "genomovar_chromosome:GCA_023734835.1",
          "genomovar_chromosome:GCA_023734855.1",
          "genomovar_chromosome:GCA_023734875.1",
          "genomovar_chromosome:GCA_023734895.1",
          "genomovar_chromosome:GCA_023734915.1",
          "genomovar_chromosome:GCA_023734935.1",
          "genomovar_chromosome:GCA_023734955.1",
          "genomovar_chromosome:GCA_023734975.1",
          "genomovar_chromosome:GCA_023734995.1",
          "genomovar_chromosome:GCA_023735015.1",
          "genomovar_chromosome:GCA_023735035.1",
          "genomovar_chromosome:GCA_023735055.1",
          "genomovar_chromosome:GCA_023735075.1",
          "genomovar_chromosome:GCA_023735155.1",
          "genomovar_chromosome:GCA_023735195.1",
          "genomovar_chromosome:GCA_023735215.1",
          "genomovar_chromosome:GCA_023735235.1",
          "genomovar_chromosome:GCA_023735255.1",
          "genomovar_chromosome:GCA_023735275.1",
          "genomovar_chromosome:GCA_023735295.1",
          "genomovar_chromosome:GCA_023735315.1",
          "genomovar_chromosome:GCA_023735335.1",
          "genomovar_chromosome:GCA_023735355.1",
          "genomovar_chromosome:GCA_023735375.1",
          "genomovar_chromosome:GCA_023735395.1",
          "genomovar_chromosome:GCA_023735435.1",
          "genomovar_chromosome:GCA_024182005.1",
          "genomovar_chromosome:GCA_024182025.1",
          "genomovar_chromosome:GCA_025266795.1",
          "genomovar_chromosome:GCA_028898905.1",
          "genomovar_chromosome:GCA_029069385.2",
          "genomovar_chromosome:GCA_029069865.2",
          "genomovar_chromosome:GCA_029070145.2",
          "genomovar_chromosome:GCA_029070185.2",
          "genomovar_chromosome:GCA_029075215.2",
          "genomovar_chromosome:GCA_029075265.2",
          "genomovar_chromosome:GCA_030847805.1",
          "genomovar_chromosome:GCA_038627095.2",
          "genomovar_chromosome:GCA_041005335.1",
          "genomovar_chromosome:GCA_041378885.1",
          "genomovar_chromosome:GCA_041378905.1",
          "genomovar_chromosome:GCA_041378915.1",
          "genomovar_chromosome:GCA_041378925.1",
          "genomovar_chromosome:GCA_041410215.1",
          "genomovar_chromosome:GCA_043967495.1",
          "genomovar_chromosome:GCA_043968025.1",
          "genomovar_chromosome:GCA_043969345.1",
          "genomovar_chromosome:GCA_043969365.1",
          "genomovar_chromosome:GCA_043970705.1",
          "genomovar_chromosome:GCA_043972045.1",
          "genomovar_chromosome:GCA_043974645.1",
          "genomovar_chromosome:GCA_046097125.1",
          "genomovar_chromosome:GCA_048568405.1",
          "genomovar_chromosome:GCA_048572805.1",
          "genomovar_chromosome:GCA_050163215.1",
          "genomovar_chromosome:GCA_050871235.1",
          "genomovar_chromosome:GCA_052073395.1",
          "genomovar_chromosome:GCA_052073625.1",
          "genomovar_chromosome:GCA_052412295.1",
          "genomovar_chromosome:GCA_052569335.1",
          "genomovar_chromosome:GCA_052982315.1",
          "genomovar_chromosome:GCA_052982375.1",
          "genomovar_chromosome:GCA_054053545.1",
          "genomovar_chromosome:GCA_905231985.2",
          "genomovar_chromosome:GCA_905232035.2",
          "genomovar_chromosome:GCA_905232455.2",
          "genomovar_chromosome:GCA_905232525.2",
          "genomovar_chromosome:GCA_905232845.2",
          "genomovar_chromosome:GCA_905233055.2",
          "genomovar_chromosome:GCA_905322485.2",
          "genomovar_chromosome:GCA_905322515.2",
          "genomovar_chromosome:GCA_905329655.2",
          "genomovar_chromosome:GCA_905330775.2"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV03",
        "minimum_af_query_percent": 82.96,
        "minimum_af_reference_percent": 85.99,
        "minimum_ani_percent": 98.73,
        "missing": [],
        "observed": 92,
        "required": 92,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_002968455.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV04",
        "minimum_af_query_percent": 84.57,
        "minimum_af_reference_percent": 90.98,
        "minimum_ani_percent": 98.86,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_003051945.2",
          "genomovar_chromosome:GCA_008931525.1",
          "genomovar_chromosome:GCA_013629235.1",
          "genomovar_chromosome:GCA_013629675.1",
          "genomovar_chromosome:GCA_013635255.1",
          "genomovar_chromosome:GCA_030411175.2",
          "genomovar_chromosome:GCA_040096145.1",
          "genomovar_chromosome:GCA_041004285.1",
          "genomovar_chromosome:GCA_047798645.1",
          "genomovar_chromosome:GCA_048572775.1",
          "genomovar_chromosome:GCA_048572795.1",
          "genomovar_chromosome:GCA_049668135.1",
          "genomovar_chromosome:GCA_050157245.1",
          "genomovar_chromosome:GCA_050157255.1",
          "genomovar_chromosome:GCA_053691715.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV05",
        "minimum_af_query_percent": 82.04,
        "minimum_af_reference_percent": 88.88,
        "minimum_ani_percent": 98.75,
        "missing": [],
        "observed": 15,
        "required": 15,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_004118875.1",
          "genomovar_chromosome:GCA_016745355.1",
          "genomovar_chromosome:GCA_029962545.1",
          "genomovar_chromosome:GCA_038627045.2",
          "genomovar_chromosome:GCA_049102985.2",
          "genomovar_chromosome:GCA_050245235.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV06",
        "minimum_af_query_percent": 84.28,
        "minimum_af_reference_percent": 91.17,
        "minimum_ani_percent": 98.86,
        "missing": [],
        "observed": 6,
        "required": 6,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_009738085.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV07",
        "minimum_af_query_percent": 87.09,
        "minimum_af_reference_percent": 90.50,
        "minimum_ani_percent": 98.97,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_012974405.1",
          "genomovar_chromosome:GCA_019048625.1",
          "genomovar_chromosome:GCA_029721335.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV08",
        "minimum_af_query_percent": 81.33,
        "minimum_af_reference_percent": 89.16,
        "minimum_ani_percent": 98.86,
        "missing": [],
        "observed": 3,
        "required": 3,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_013375955.1",
          "genomovar_chromosome:GCA_030848025.1",
          "genomovar_chromosome:GCA_036687415.1",
          "genomovar_chromosome:GCA_052921675.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV09",
        "minimum_af_query_percent": 83.44,
        "minimum_af_reference_percent": 88.91,
        "minimum_ani_percent": 98.86,
        "missing": [],
        "observed": 4,
        "required": 4,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [],
        "group": "ECTX-GV-2026-10-02-v1-GV10",
        "minimum_af_query_percent": 86.73,
        "minimum_af_reference_percent": 93.27,
        "minimum_ani_percent": 99.68,
        "missing": [],
        "observed": 12,
        "required": 12,
        "state": "compatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_013625435.1",
          "genomovar_chromosome:GCA_050239815.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV11",
        "minimum_af_query_percent": 83.64,
        "minimum_af_reference_percent": 90.75,
        "minimum_ani_percent": 98.90,
        "missing": [],
        "observed": 2,
        "required": 2,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_013629455.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV12",
        "minimum_af_query_percent": 85.46,
        "minimum_af_reference_percent": 88.05,
        "minimum_ani_percent": 98.48,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_013635495.1",
          "genomovar_chromosome:GCA_050161365.1",
          "genomovar_chromosome:GCA_050165125.1",
          "genomovar_chromosome:GCA_050165795.1",
          "genomovar_chromosome:GCA_050166045.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV13",
        "minimum_af_query_percent": 83.30,
        "minimum_af_reference_percent": 88.74,
        "minimum_ani_percent": 98.86,
        "missing": [],
        "observed": 5,
        "required": 5,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_013873515.1",
          "genomovar_chromosome:GCA_905331365.2"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV14",
        "minimum_af_query_percent": 82.74,
        "minimum_af_reference_percent": 92.09,
        "minimum_ani_percent": 98.97,
        "missing": [],
        "observed": 2,
        "required": 2,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_027595125.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV15",
        "minimum_af_query_percent": 83.06,
        "minimum_af_reference_percent": 91.20,
        "minimum_ani_percent": 98.92,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_031165635.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV16",
        "minimum_af_query_percent": 83.30,
        "minimum_af_reference_percent": 92.27,
        "minimum_ani_percent": 98.92,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_035323065.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV17",
        "minimum_af_query_percent": 82.76,
        "minimum_af_reference_percent": 92.51,
        "minimum_ani_percent": 99.03,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_035323845.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV18",
        "minimum_af_query_percent": 82.56,
        "minimum_af_reference_percent": 93.79,
        "minimum_ani_percent": 99.03,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_041004125.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV19",
        "minimum_af_query_percent": 84.52,
        "minimum_af_reference_percent": 93.22,
        "minimum_ani_percent": 99.02,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_041004465.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV20",
        "minimum_af_query_percent": 83.61,
        "minimum_af_reference_percent": 94.06,
        "minimum_ani_percent": 98.97,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_044792965.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV21",
        "minimum_af_query_percent": 81.97,
        "minimum_af_reference_percent": 92.40,
        "minimum_ani_percent": 98.81,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_050186865.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV22",
        "minimum_af_query_percent": 83.89,
        "minimum_af_reference_percent": 90.83,
        "minimum_ani_percent": 98.86,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_050260315.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV23",
        "minimum_af_query_percent": 82.62,
        "minimum_af_reference_percent": 93.72,
        "minimum_ani_percent": 99.08,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_051089665.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV24",
        "minimum_af_query_percent": 84.24,
        "minimum_af_reference_percent": 93.65,
        "minimum_ani_percent": 98.97,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      },
      {
        "below_member_af": [],
        "below_threshold": [
          "genomovar_chromosome:GCA_900635705.1"
        ],
        "group": "ECTX-GV-2026-10-02-v1-GV25",
        "minimum_af_query_percent": 82.10,
        "minimum_af_reference_percent": 94.06,
        "minimum_ani_percent": 99.03,
        "missing": [],
        "observed": 1,
        "required": 1,
        "state": "incompatible"
      }
    ],
    "incomplete_groups": [],
    "parent": {
      "blocking_reasons": [],
      "policy_id": "conservative-assembly-anim-v2",
      "policy_sha256": "4bf50abd9600250d5c66a3d0ddb94a70a4c88326a95a386c72a2a947dc053705",
      "query_sha256": "603ed679732e01cb7d1a06ec73d89a53fc12b6f6b22f071df5dee866cdf982b9",
      "reference_package_sha256": "f7c82d8e912fdb08aec93b190316f482fd462b3c514c5b374f8c694af1278e28",
      "result_sha256": "c51fc35e2019d8dd51f66434bf5354650c78c917cea04e876e10518b14125bee",
      "scope_outcome": "not_assessed",
      "species_id": "ECTX-SP025",
      "status": "assigned",
      "subspecies_id": "ECTX-SS007",
      "verified": true
    },
    "policy_id": "p3a-genomovar-contract-r1",
    "policy_sha256": "2be813fc55756bd819aff0626a59063b4842f3fa86ec9a4cd9e80e276dc80185",
    "reasons": [],
    "rule": {
      "ani_minimum_percent": 99.50,
      "both_af_minimum_percent": 80.00,
      "every_member": true,
      "rival_exclusion": "measured_below_threshold_member"
    },
    "search": {
      "adapter_verified": true,
      "component_id": "genomovar_chromosome",
      "diagnostic_exclusion": false,
      "engine": "skani",
      "engine_profile": "skani-0.3.2-avx2-content-order-dna-v2",
      "engine_revision": "22da4ae9e44b2e3e686c8e5c71fcd16cec2b9791",
      "engine_version": "0.3.2",
      "input_kind": "assembly",
      "member_evidence": [
        {
          "aligned_fraction_query_percent": 94.71,
          "aligned_fraction_reference_percent": 100.00,
          "ani_percent": 100.00,
          "reference_id": "genomovar_chromosome:GCA_013738375.1"
        },
        {
          "aligned_fraction_query_percent": 86.73,
          "aligned_fraction_reference_percent": 94.67,
          "ani_percent": 99.91,
          "reference_id": "genomovar_chromosome:GCA_013740655.1"
        },
        {
          "aligned_fraction_query_percent": 87.52,
          "aligned_fraction_reference_percent": 95.07,
          "ani_percent": 99.89,
          "reference_id": "genomovar_chromosome:GCA_013625115.1"
        },
        {
          "aligned_fraction_query_percent": 88.32,
          "aligned_fraction_reference_percent": 96.28,
          "ani_percent": 99.85,
          "reference_id": "genomovar_chromosome:GCA_905338035.2"
        },
        {
          "aligned_fraction_query_percent": 88.35,
          "aligned_fraction_reference_percent": 93.27,
          "ani_percent": 99.78,
          "reference_id": "genomovar_chromosome:GCA_013624995.1"
        },
        {
          "aligned_fraction_query_percent": 88.72,
          "aligned_fraction_reference_percent": 94.99,
          "ani_percent": 99.78,
          "reference_id": "genomovar_chromosome:GCA_013734915.1"
        },
        {
          "aligned_fraction_query_percent": 89.84,
          "aligned_fraction_reference_percent": 93.62,
          "ani_percent": 99.78,
          "reference_id": "genomovar_chromosome:GCA_013736395.1"
        },
        {
          "aligned_fraction_query_percent": 87.80,
          "aligned_fraction_reference_percent": 95.10,
          "ani_percent": 99.78,
          "reference_id": "genomovar_chromosome:GCA_013742375.1"
        },
        {
          "aligned_fraction_query_percent": 89.07,
          "aligned_fraction_reference_percent": 94.44,
          "ani_percent": 99.73,
          "reference_id": "genomovar_chromosome:GCA_013739595.1"
        },
        {
          "aligned_fraction_query_percent": 90.29,
          "aligned_fraction_reference_percent": 94.56,
          "ani_percent": 99.72,
          "reference_id": "genomovar_chromosome:GCA_013733565.1"
        },
        {
          "aligned_fraction_query_percent": 90.45,
          "aligned_fraction_reference_percent": 93.72,
          "ani_percent": 99.71,
          "reference_id": "genomovar_chromosome:GCA_013734275.1"
        },
        {
          "aligned_fraction_query_percent": 88.41,
          "aligned_fraction_reference_percent": 94.77,
          "ani_percent": 99.68,
          "reference_id": "genomovar_chromosome:GCA_013624605.1"
        },
        {
          "aligned_fraction_query_percent": 84.00,
          "aligned_fraction_reference_percent": 92.97,
          "ani_percent": 99.14,
          "reference_id": "genomovar_chromosome:GCA_013625795.1"
        },
        {
          "aligned_fraction_query_percent": 83.69,
          "aligned_fraction_reference_percent": 94.20,
          "ani_percent": 99.09,
          "reference_id": "genomovar_chromosome:GCA_000750225.1"
        },
        {
          "aligned_fraction_query_percent": 83.64,
          "aligned_fraction_reference_percent": 94.27,
          "ani_percent": 99.09,
          "reference_id": "genomovar_chromosome:GCA_000784905.1"
        },
        {
          "aligned_fraction_query_percent": 84.30,
          "aligned_fraction_reference_percent": 94.43,
          "ani_percent": 99.09,
          "reference_id": "genomovar_chromosome:GCA_023735195.1"
        },
        {
          "aligned_fraction_query_percent": 82.04,
          "aligned_fraction_reference_percent": 92.83,
          "ani_percent": 99.09,
          "reference_id": "genomovar_chromosome:GCA_041004285.1"
        },
        {
          "aligned_fraction_query_percent": 84.20,
          "aligned_fraction_reference_percent": 94.08,
          "ani_percent": 99.09,
          "reference_id": "genomovar_chromosome:GCA_905322515.2"
        },
        {
          "aligned_fraction_query_percent": 82.43,
          "aligned_fraction_reference_percent": 94.54,
          "ani_percent": 99.08,
          "reference_id": "genomovar_chromosome:GCA_001729745.1"
        },
        {
          "aligned_fraction_query_percent": 83.54,
          "aligned_fraction_reference_percent": 94.72,
          "ani_percent": 99.08,
          "reference_id": "genomovar_chromosome:GCA_012974405.1"
        },
        {
          "aligned_fraction_query_percent": 84.63,
          "aligned_fraction_reference_percent": 94.36,
          "ani_percent": 99.08,
          "reference_id": "genomovar_chromosome:GCA_023734815.1"
        },
        {
          "aligned_fraction_query_percent": 84.24,
          "aligned_fraction_reference_percent": 93.70,
          "ani_percent": 99.08,
          "reference_id": "genomovar_chromosome:GCA_023734895.1"
        },
        {
          "aligned_fraction_query_percent": 84.22,
          "aligned_fraction_reference_percent": 93.69,
          "ani_percent": 99.08,
          "reference_id": "genomovar_chromosome:GCA_023735375.1"
        },
        {
          "aligned_fraction_query_percent": 84.24,
          "aligned_fraction_reference_percent": 93.74,
          "ani_percent": 99.08,
          "reference_id": "genomovar_chromosome:GCA_023735395.1"
        },
        {
          "aligned_fraction_query_percent": 84.16,
          "aligned_fraction_reference_percent": 94.71,
          "ani_percent": 99.08,
          "reference_id": "genomovar_chromosome:GCA_046097125.1"
        },
        {
          "aligned_fraction_query_percent": 82.62,
          "aligned_fraction_reference_percent": 93.72,
          "ani_percent": 99.08,
          "reference_id": "genomovar_chromosome:GCA_050260315.1"
        },
        {
          "aligned_fraction_query_percent": 84.21,
          "aligned_fraction_reference_percent": 94.55,
          "ani_percent": 99.08,
          "reference_id": "genomovar_chromosome:GCA_905232035.2"
        },
        {
          "aligned_fraction_query_percent": 84.48,
          "aligned_fraction_reference_percent": 92.99,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_017161605.1"
        },
        {
          "aligned_fraction_query_percent": 84.48,
          "aligned_fraction_reference_percent": 93.00,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_017161745.1"
        },
        {
          "aligned_fraction_query_percent": 84.46,
          "aligned_fraction_reference_percent": 92.97,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_017161805.1"
        },
        {
          "aligned_fraction_query_percent": 84.47,
          "aligned_fraction_reference_percent": 93.63,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_017161825.1"
        },
        {
          "aligned_fraction_query_percent": 84.48,
          "aligned_fraction_reference_percent": 93.00,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_017161845.1"
        },
        {
          "aligned_fraction_query_percent": 84.47,
          "aligned_fraction_reference_percent": 93.63,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_017161865.1"
        },
        {
          "aligned_fraction_query_percent": 84.40,
          "aligned_fraction_reference_percent": 92.43,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_021869625.1"
        },
        {
          "aligned_fraction_query_percent": 84.45,
          "aligned_fraction_reference_percent": 92.57,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_021869665.1"
        },
        {
          "aligned_fraction_query_percent": 84.11,
          "aligned_fraction_reference_percent": 92.30,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_023735015.1"
        },
        {
          "aligned_fraction_query_percent": 83.67,
          "aligned_fraction_reference_percent": 94.29,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_029075265.2"
        },
        {
          "aligned_fraction_query_percent": 82.56,
          "aligned_fraction_reference_percent": 94.97,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_029721335.1"
        },
        {
          "aligned_fraction_query_percent": 82.76,
          "aligned_fraction_reference_percent": 92.51,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_035323065.1"
        },
        {
          "aligned_fraction_query_percent": 82.56,
          "aligned_fraction_reference_percent": 93.79,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_035323845.1"
        },
        {
          "aligned_fraction_query_percent": 84.27,
          "aligned_fraction_reference_percent": 91.67,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_041005825.1"
        },
        {
          "aligned_fraction_query_percent": 84.37,
          "aligned_fraction_reference_percent": 91.83,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_051093565.1"
        },
        {
          "aligned_fraction_query_percent": 83.79,
          "aligned_fraction_reference_percent": 91.52,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_053691715.1"
        },
        {
          "aligned_fraction_query_percent": 82.10,
          "aligned_fraction_reference_percent": 94.06,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_900635705.1"
        },
        {
          "aligned_fraction_query_percent": 84.34,
          "aligned_fraction_reference_percent": 90.73,
          "ani_percent": 99.03,
          "reference_id": "genomovar_chromosome:GCA_905232525.2"
        },
        {
          "aligned_fraction_query_percent": 83.72,
          "aligned_fraction_reference_percent": 94.48,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_000750275.1"
        },
        {
          "aligned_fraction_query_percent": 84.15,
          "aligned_fraction_reference_percent": 93.36,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_002201815.1"
        },
        {
          "aligned_fraction_query_percent": 83.68,
          "aligned_fraction_reference_percent": 91.49,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_013629235.1"
        },
        {
          "aligned_fraction_query_percent": 82.74,
          "aligned_fraction_reference_percent": 93.81,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_013873515.1"
        },
        {
          "aligned_fraction_query_percent": 84.44,
          "aligned_fraction_reference_percent": 92.93,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_017161725.1"
        },
        {
          "aligned_fraction_query_percent": 84.51,
          "aligned_fraction_reference_percent": 93.61,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_017161785.1"
        },
        {
          "aligned_fraction_query_percent": 84.65,
          "aligned_fraction_reference_percent": 92.97,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_023734855.1"
        },
        {
          "aligned_fraction_query_percent": 84.16,
          "aligned_fraction_reference_percent": 92.24,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_023735235.1"
        },
        {
          "aligned_fraction_query_percent": 85.00,
          "aligned_fraction_reference_percent": 93.75,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_023735255.1"
        },
        {
          "aligned_fraction_query_percent": 84.70,
          "aligned_fraction_reference_percent": 94.01,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_023735355.1"
        },
        {
          "aligned_fraction_query_percent": 84.34,
          "aligned_fraction_reference_percent": 92.24,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_028898905.1"
        },
        {
          "aligned_fraction_query_percent": 84.60,
          "aligned_fraction_reference_percent": 93.54,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_029962545.1"
        },
        {
          "aligned_fraction_query_percent": 84.52,
          "aligned_fraction_reference_percent": 93.22,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_041004125.1"
        },
        {
          "aligned_fraction_query_percent": 83.48,
          "aligned_fraction_reference_percent": 91.26,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_048572795.1"
        },
        {
          "aligned_fraction_query_percent": 84.20,
          "aligned_fraction_reference_percent": 89.59,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_050157245.1"
        },
        {
          "aligned_fraction_query_percent": 84.15,
          "aligned_fraction_reference_percent": 92.52,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_052982375.1"
        },
        {
          "aligned_fraction_query_percent": 85.12,
          "aligned_fraction_reference_percent": 94.13,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_905322485.2"
        },
        {
          "aligned_fraction_query_percent": 84.32,
          "aligned_fraction_reference_percent": 90.44,
          "ani_percent": 99.02,
          "reference_id": "genomovar_chromosome:GCA_905330775.2"
        },
        {
          "aligned_fraction_query_percent": 84.77,
          "aligned_fraction_reference_percent": 85.99,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_003031445.1"
        },
        {
          "aligned_fraction_query_percent": 87.09,
          "aligned_fraction_reference_percent": 90.50,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_009738085.1"
        },
        {
          "aligned_fraction_query_percent": 85.11,
          "aligned_fraction_reference_percent": 91.61,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_009834325.1"
        },
        {
          "aligned_fraction_query_percent": 84.12,
          "aligned_fraction_reference_percent": 93.56,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_010319625.1"
        },
        {
          "aligned_fraction_query_percent": 83.64,
          "aligned_fraction_reference_percent": 90.75,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_013625435.1"
        },
        {
          "aligned_fraction_query_percent": 84.70,
          "aligned_fraction_reference_percent": 93.86,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_016864035.1"
        },
        {
          "aligned_fraction_query_percent": 84.39,
          "aligned_fraction_reference_percent": 93.88,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_017161765.1"
        },
        {
          "aligned_fraction_query_percent": 84.95,
          "aligned_fraction_reference_percent": 93.80,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_023734795.1"
        },
        {
          "aligned_fraction_query_percent": 84.73,
          "aligned_fraction_reference_percent": 92.31,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_023734915.1"
        },
        {
          "aligned_fraction_query_percent": 84.74,
          "aligned_fraction_reference_percent": 92.36,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_023734995.1"
        },
        {
          "aligned_fraction_query_percent": 84.72,
          "aligned_fraction_reference_percent": 92.34,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_023735035.1"
        },
        {
          "aligned_fraction_query_percent": 84.64,
          "aligned_fraction_reference_percent": 92.94,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_023735055.1"
        },
        {
          "aligned_fraction_query_percent": 84.67,
          "aligned_fraction_reference_percent": 92.23,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_023735075.1"
        },
        {
          "aligned_fraction_query_percent": 85.24,
          "aligned_fraction_reference_percent": 93.59,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_023735295.1"
        },
        {
          "aligned_fraction_query_percent": 84.74,
          "aligned_fraction_reference_percent": 93.05,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_023735315.1"
        },
        {
          "aligned_fraction_query_percent": 84.48,
          "aligned_fraction_reference_percent": 92.89,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_024182005.1"
        },
        {
          "aligned_fraction_query_percent": 84.48,
          "aligned_fraction_reference_percent": 93.83,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_029069865.2"
        },
        {
          "aligned_fraction_query_percent": 83.97,
          "aligned_fraction_reference_percent": 94.29,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_029070145.2"
        },
        {
          "aligned_fraction_query_percent": 83.96,
          "aligned_fraction_reference_percent": 94.29,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_029075215.2"
        },
        {
          "aligned_fraction_query_percent": 83.62,
          "aligned_fraction_reference_percent": 92.42,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_030847805.1"
        },
        {
          "aligned_fraction_query_percent": 84.02,
          "aligned_fraction_reference_percent": 92.64,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_038627095.2"
        },
        {
          "aligned_fraction_query_percent": 83.61,
          "aligned_fraction_reference_percent": 94.06,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_041004465.1"
        },
        {
          "aligned_fraction_query_percent": 85.04,
          "aligned_fraction_reference_percent": 91.49,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_041378905.1"
        },
        {
          "aligned_fraction_query_percent": 85.01,
          "aligned_fraction_reference_percent": 90.96,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_043967495.1"
        },
        {
          "aligned_fraction_query_percent": 84.68,
          "aligned_fraction_reference_percent": 90.06,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_043969365.1"
        },
        {
          "aligned_fraction_query_percent": 85.11,
          "aligned_fraction_reference_percent": 91.04,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_043970705.1"
        },
        {
          "aligned_fraction_query_percent": 85.09,
          "aligned_fraction_reference_percent": 91.04,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_043972045.1"
        },
        {
          "aligned_fraction_query_percent": 84.72,
          "aligned_fraction_reference_percent": 93.57,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_043974645.1"
        },
        {
          "aligned_fraction_query_percent": 82.98,
          "aligned_fraction_reference_percent": 91.25,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_047798645.1"
        },
        {
          "aligned_fraction_query_percent": 84.36,
          "aligned_fraction_reference_percent": 93.22,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_048568405.1"
        },
        {
          "aligned_fraction_query_percent": 84.06,
          "aligned_fraction_reference_percent": 91.28,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_048572775.1"
        },
        {
          "aligned_fraction_query_percent": 83.98,
          "aligned_fraction_reference_percent": 91.19,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_049668135.1"
        },
        {
          "aligned_fraction_query_percent": 84.27,
          "aligned_fraction_reference_percent": 92.71,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_050162345.1"
        },
        {
          "aligned_fraction_query_percent": 84.25,
          "aligned_fraction_reference_percent": 95.34,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_050163215.1"
        },
        {
          "aligned_fraction_query_percent": 83.54,
          "aligned_fraction_reference_percent": 92.46,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_050165795.1"
        },
        {
          "aligned_fraction_query_percent": 84.24,
          "aligned_fraction_reference_percent": 93.65,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_051089665.1"
        },
        {
          "aligned_fraction_query_percent": 84.37,
          "aligned_fraction_reference_percent": 91.39,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_051092825.1"
        },
        {
          "aligned_fraction_query_percent": 84.13,
          "aligned_fraction_reference_percent": 92.26,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_052569335.1"
        },
        {
          "aligned_fraction_query_percent": 84.76,
          "aligned_fraction_reference_percent": 91.60,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_052713485.2"
        },
        {
          "aligned_fraction_query_percent": 85.14,
          "aligned_fraction_reference_percent": 92.02,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_052922205.1"
        },
        {
          "aligned_fraction_query_percent": 84.15,
          "aligned_fraction_reference_percent": 92.52,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_052982315.1"
        },
        {
          "aligned_fraction_query_percent": 84.16,
          "aligned_fraction_reference_percent": 92.53,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_054053545.1"
        },
        {
          "aligned_fraction_query_percent": 84.78,
          "aligned_fraction_reference_percent": 93.25,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_905232455.2"
        },
        {
          "aligned_fraction_query_percent": 84.44,
          "aligned_fraction_reference_percent": 93.28,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_905233055.2"
        },
        {
          "aligned_fraction_query_percent": 84.42,
          "aligned_fraction_reference_percent": 93.26,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_905329655.2"
        },
        {
          "aligned_fraction_query_percent": 82.87,
          "aligned_fraction_reference_percent": 92.09,
          "ani_percent": 98.97,
          "reference_id": "genomovar_chromosome:GCA_905331365.2"
        },
        {
          "aligned_fraction_query_percent": 84.79,
          "aligned_fraction_reference_percent": 91.17,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_004118875.1"
        },
        {
          "aligned_fraction_query_percent": 83.63,
          "aligned_fraction_reference_percent": 90.97,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_013635255.1"
        },
        {
          "aligned_fraction_query_percent": 84.45,
          "aligned_fraction_reference_percent": 93.96,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_016745355.1"
        },
        {
          "aligned_fraction_query_percent": 84.38,
          "aligned_fraction_reference_percent": 93.34,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_021725435.1"
        },
        {
          "aligned_fraction_query_percent": 85.08,
          "aligned_fraction_reference_percent": 93.90,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_023734875.1"
        },
        {
          "aligned_fraction_query_percent": 84.80,
          "aligned_fraction_reference_percent": 92.42,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_023734935.1"
        },
        {
          "aligned_fraction_query_percent": 85.29,
          "aligned_fraction_reference_percent": 93.38,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_023734955.1"
        },
        {
          "aligned_fraction_query_percent": 85.29,
          "aligned_fraction_reference_percent": 93.46,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_023735155.1"
        },
        {
          "aligned_fraction_query_percent": 85.23,
          "aligned_fraction_reference_percent": 93.40,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_023735215.1"
        },
        {
          "aligned_fraction_query_percent": 85.23,
          "aligned_fraction_reference_percent": 93.40,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_023735275.1"
        },
        {
          "aligned_fraction_query_percent": 84.80,
          "aligned_fraction_reference_percent": 91.89,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_023735335.1"
        },
        {
          "aligned_fraction_query_percent": 84.46,
          "aligned_fraction_reference_percent": 92.96,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_023735435.1"
        },
        {
          "aligned_fraction_query_percent": 84.50,
          "aligned_fraction_reference_percent": 93.46,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_025266795.1"
        },
        {
          "aligned_fraction_query_percent": 83.06,
          "aligned_fraction_reference_percent": 91.20,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_027595125.1"
        },
        {
          "aligned_fraction_query_percent": 84.39,
          "aligned_fraction_reference_percent": 93.75,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_029069385.2"
        },
        {
          "aligned_fraction_query_percent": 84.39,
          "aligned_fraction_reference_percent": 93.75,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_029070185.2"
        },
        {
          "aligned_fraction_query_percent": 84.39,
          "aligned_fraction_reference_percent": 88.91,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_030848025.1"
        },
        {
          "aligned_fraction_query_percent": 83.30,
          "aligned_fraction_reference_percent": 92.27,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_031165635.1"
        },
        {
          "aligned_fraction_query_percent": 84.62,
          "aligned_fraction_reference_percent": 91.91,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_038069265.2"
        },
        {
          "aligned_fraction_query_percent": 85.32,
          "aligned_fraction_reference_percent": 91.13,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_041378915.1"
        },
        {
          "aligned_fraction_query_percent": 85.31,
          "aligned_fraction_reference_percent": 91.12,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_041378925.1"
        },
        {
          "aligned_fraction_query_percent": 85.03,
          "aligned_fraction_reference_percent": 91.84,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_041410215.1"
        },
        {
          "aligned_fraction_query_percent": 85.34,
          "aligned_fraction_reference_percent": 90.51,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_043969345.1"
        },
        {
          "aligned_fraction_query_percent": 84.19,
          "aligned_fraction_reference_percent": 91.21,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_050157255.1"
        },
        {
          "aligned_fraction_query_percent": 85.02,
          "aligned_fraction_reference_percent": 93.33,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_050245065.1"
        },
        {
          "aligned_fraction_query_percent": 85.14,
          "aligned_fraction_reference_percent": 92.20,
          "ani_percent": 98.92,
          "reference_id": "genomovar_chromosome:GCA_052073625.1"
        },
        {
          "aligned_fraction_query_percent": 83.75,
          "aligned_fraction_reference_percent": 88.74,
          "ani_percent": 98.91,
          "reference_id": "genomovar_chromosome:GCA_013635495.1"
        },
        {
          "aligned_fraction_query_percent": 85.29,
          "aligned_fraction_reference_percent": 91.70,
          "ani_percent": 98.91,
          "reference_id": "genomovar_chromosome:GCA_021398115.1"
        },
        {
          "aligned_fraction_query_percent": 82.84,
          "aligned_fraction_reference_percent": 93.34,
          "ani_percent": 98.91,
          "reference_id": "genomovar_chromosome:GCA_030411175.2"
        },
        {
          "aligned_fraction_query_percent": 84.82,
          "aligned_fraction_reference_percent": 94.22,
          "ani_percent": 98.91,
          "reference_id": "genomovar_chromosome:GCA_041005335.1"
        },
        {
          "aligned_fraction_query_percent": 85.01,
          "aligned_fraction_reference_percent": 93.64,
          "ani_percent": 98.91,
          "reference_id": "genomovar_chromosome:GCA_050871235.1"
        },
        {
          "aligned_fraction_query_percent": 84.81,
          "aligned_fraction_reference_percent": 92.11,
          "ani_percent": 98.91,
          "reference_id": "genomovar_chromosome:GCA_050871245.1"
        },
        {
          "aligned_fraction_query_percent": 84.89,
          "aligned_fraction_reference_percent": 92.10,
          "ani_percent": 98.91,
          "reference_id": "genomovar_chromosome:GCA_052073395.1"
        },
        {
          "aligned_fraction_query_percent": 82.51,
          "aligned_fraction_reference_percent": 88.88,
          "ani_percent": 98.90,
          "reference_id": "genomovar_chromosome:GCA_008931525.1"
        },
        {
          "aligned_fraction_query_percent": 85.30,
          "aligned_fraction_reference_percent": 91.70,
          "ani_percent": 98.90,
          "reference_id": "genomovar_chromosome:GCA_021397695.1"
        },
        {
          "aligned_fraction_query_percent": 83.09,
          "aligned_fraction_reference_percent": 91.76,
          "ani_percent": 98.90,
          "reference_id": "genomovar_chromosome:GCA_023734835.1"
        },
        {
          "aligned_fraction_query_percent": 84.84,
          "aligned_fraction_reference_percent": 92.31,
          "ani_percent": 98.90,
          "reference_id": "genomovar_chromosome:GCA_023734975.1"
        },
        {
          "aligned_fraction_query_percent": 84.87,
          "aligned_fraction_reference_percent": 93.73,
          "ani_percent": 98.90,
          "reference_id": "genomovar_chromosome:GCA_038627045.2"
        },
        {
          "aligned_fraction_query_percent": 84.45,
          "aligned_fraction_reference_percent": 92.98,
          "ani_percent": 98.90,
          "reference_id": "genomovar_chromosome:GCA_041378885.1"
        },
        {
          "aligned_fraction_query_percent": 82.96,
          "aligned_fraction_reference_percent": 90.70,
          "ani_percent": 98.90,
          "reference_id": "genomovar_chromosome:GCA_043968025.1"
        },
        {
          "aligned_fraction_query_percent": 83.30,
          "aligned_fraction_reference_percent": 92.19,
          "ani_percent": 98.90,
          "reference_id": "genomovar_chromosome:GCA_050165125.1"
        },
        {
          "aligned_fraction_query_percent": 83.43,
          "aligned_fraction_reference_percent": 92.34,
          "ani_percent": 98.90,
          "reference_id": "genomovar_chromosome:GCA_050166045.1"
        },
        {
          "aligned_fraction_query_percent": 84.62,
          "aligned_fraction_reference_percent": 91.66,
          "ani_percent": 98.90,
          "reference_id": "genomovar_chromosome:GCA_050239815.1"
        },
        {
          "aligned_fraction_query_percent": 84.28,
          "aligned_fraction_reference_percent": 93.92,
          "ani_percent": 98.90,
          "reference_id": "genomovar_chromosome:GCA_050245235.1"
        },
        {
          "aligned_fraction_query_percent": 83.56,
          "aligned_fraction_reference_percent": 89.63,
          "ani_percent": 98.88,
          "reference_id": "genomovar_chromosome:GCA_040096145.1"
        },
        {
          "aligned_fraction_query_percent": 84.57,
          "aligned_fraction_reference_percent": 90.98,
          "ani_percent": 98.86,
          "reference_id": "genomovar_chromosome:GCA_002968455.1"
        },
        {
          "aligned_fraction_query_percent": 83.45,
          "aligned_fraction_reference_percent": 90.47,
          "ani_percent": 98.86,
          "reference_id": "genomovar_chromosome:GCA_013375955.1"
        },
        {
          "aligned_fraction_query_percent": 81.33,
          "aligned_fraction_reference_percent": 89.16,
          "ani_percent": 98.86,
          "reference_id": "genomovar_chromosome:GCA_019048625.1"
        },
        {
          "aligned_fraction_query_percent": 84.21,
          "aligned_fraction_reference_percent": 89.48,
          "ani_percent": 98.86,
          "reference_id": "genomovar_chromosome:GCA_036687415.1"
        },
        {
          "aligned_fraction_query_percent": 84.95,
          "aligned_fraction_reference_percent": 90.59,
          "ani_percent": 98.86,
          "reference_id": "genomovar_chromosome:GCA_048388455.1"
        },
        {
          "aligned_fraction_query_percent": 84.91,
          "aligned_fraction_reference_percent": 92.08,
          "ani_percent": 98.86,
          "reference_id": "genomovar_chromosome:GCA_049102985.2"
        },
        {
          "aligned_fraction_query_percent": 83.36,
          "aligned_fraction_reference_percent": 92.26,
          "ani_percent": 98.86,
          "reference_id": "genomovar_chromosome:GCA_050161365.1"
        },
        {
          "aligned_fraction_query_percent": 83.89,
          "aligned_fraction_reference_percent": 90.83,
          "ani_percent": 98.86,
          "reference_id": "genomovar_chromosome:GCA_050186865.1"
        },
        {
          "aligned_fraction_query_percent": 83.44,
          "aligned_fraction_reference_percent": 91.72,
          "ani_percent": 98.86,
          "reference_id": "genomovar_chromosome:GCA_052921675.1"
        },
        {
          "aligned_fraction_query_percent": 84.84,
          "aligned_fraction_reference_percent": 92.57,
          "ani_percent": 98.86,
          "reference_id": "genomovar_chromosome:GCA_905231985.2"
        },
        {
          "aligned_fraction_query_percent": 81.97,
          "aligned_fraction_reference_percent": 92.40,
          "ani_percent": 98.81,
          "reference_id": "genomovar_chromosome:GCA_044792965.1"
        },
        {
          "aligned_fraction_query_percent": 84.77,
          "aligned_fraction_reference_percent": 91.89,
          "ani_percent": 98.81,
          "reference_id": "genomovar_chromosome:GCA_052412295.1"
        },
        {
          "aligned_fraction_query_percent": 85.63,
          "aligned_fraction_reference_percent": 92.26,
          "ani_percent": 98.81,
          "reference_id": "genomovar_chromosome:GCA_905232845.2"
        },
        {
          "aligned_fraction_query_percent": 85.53,
          "aligned_fraction_reference_percent": 90.09,
          "ani_percent": 98.80,
          "reference_id": "genomovar_chromosome:GCA_014117285.1"
        },
        {
          "aligned_fraction_query_percent": 85.22,
          "aligned_fraction_reference_percent": 91.53,
          "ani_percent": 98.80,
          "reference_id": "genomovar_chromosome:GCA_024182025.1"
        },
        {
          "aligned_fraction_query_percent": 82.60,
          "aligned_fraction_reference_percent": 90.19,
          "ani_percent": 98.75,
          "reference_id": "genomovar_chromosome:GCA_003051945.2"
        },
        {
          "aligned_fraction_query_percent": 82.39,
          "aligned_fraction_reference_percent": 89.19,
          "ani_percent": 98.75,
          "reference_id": "genomovar_chromosome:GCA_013629675.1"
        },
        {
          "aligned_fraction_query_percent": 85.09,
          "aligned_fraction_reference_percent": 91.61,
          "ani_percent": 98.73,
          "reference_id": "genomovar_chromosome:GCA_048572805.1"
        },
        {
          "aligned_fraction_query_percent": 85.46,
          "aligned_fraction_reference_percent": 88.05,
          "ani_percent": 98.48,
          "reference_id": "genomovar_chromosome:GCA_013629455.1"
        }
      ],
      "not_returned_reference_ids": [],
      "parameters": "c125_m1000_learnedANI_s80_minAF0_uncapped",
      "query_scope": "whole_assembly_as_supplied",
      "query_sha256": "603ed679732e01cb7d1a06ec73d89a53fc12b6f6b22f071df5dee866cdf982b9",
      "reference_count": 173,
      "reference_package_sha256": "f7c82d8e912fdb08aec93b190316f482fd462b3c514c5b374f8c694af1278e28",
      "reference_scope": "historical_chromosome_record_set",
      "returned_count": 173,
      "status": "completed"
    },
    "status": "assigned",
    "warnings": [
      "Operational match to a frozen definition, not a population boundary or purity estimate."
    ]
  },
  "genomovar_id": "ECTX-GV-2026-10-02-v1-GV10",
  "implementation": {
    "name": "pterobacter",
    "version": "0.0.0"
  },
  "input": {
    "anim": {
      "binding": "supplied_records",
      "bound_pairs": [],
      "excluded": [],
      "method_profile": null,
      "other_query_records": 0,
      "source": "generated_native_pairs",
      "unattributed_records": 0
    },
    "bytes": 5280992,
    "engine_version": "0.3.2",
    "evidence_schema": "2.0.0-dev-evidence",
    "evidence_sha256": "fa30effe40ead1906508371b3e110d4a4a982991c675e2122d7703767103b9b7",
    "file": "GCA_013738375.1.fna",
    "kind": "assembly",
    "mask": {
      "assessed_panel_reference_count": 140,
      "excluded_reference_ids": [],
      "panel_reference_count": 140
    },
    "ordinal": 1,
    "primary_inventory_sha256": "254ae64f778017decf384eb946997722f73f9ae25e1001fc25cd1eb7f72b305b",
    "query_sha256": "603ed679732e01cb7d1a06ec73d89a53fc12b6f6b22f071df5dee866cdf982b9",
    "records": [
      {
        "header": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "length": 4939254,
        "ordinal": 1,
        "sequence_sha256": "697ad265ae31a962fdac1250d83ab86bf389366219e16405f36cb8a09050cda4"
      },
      {
        "header": "CP056720.1 Enterobacter hormaechei strain RHBSTW-00333 plasmid pRHBSTW-00333_2, complete sequence",
        "length": 123311,
        "ordinal": 2,
        "sequence_sha256": "cec4c37b890897578092ffd0cba117199be8e306056a3a224f99acdc825747f8"
      },
      {
        "header": "CP056721.1 Enterobacter hormaechei strain RHBSTW-00333 plasmid pRHBSTW-00333_3, complete sequence",
        "length": 118204,
        "ordinal": 3,
        "sequence_sha256": "ab60e1ff7fe303fdabeefe6a9b5d9cc450777ddc3ab279a508ae3e4da3143a83"
      },
      {
        "header": "CP056722.1 Enterobacter hormaechei strain RHBSTW-00333 plasmid pRHBSTW-00333_4, complete sequence",
        "length": 15144,
        "ordinal": 4,
        "sequence_sha256": "0e44b3e5dfa7a331f7a34d93de05fc1e2153194168e089548c3b8a3b02689ca1"
      },
      {
        "header": "CP056723.1 Enterobacter hormaechei strain RHBSTW-00333 plasmid pRHBSTW-00333_5, complete sequence",
        "length": 6974,
        "ordinal": 5,
        "sequence_sha256": "328d57a48ffbed582ce3c8504fea0bd149ece226ada478dfbddab0bdcd73d73d"
      },
      {
        "header": "CP056724.1 Enterobacter hormaechei strain RHBSTW-00333 plasmid pRHBSTW-00333_6, complete sequence",
        "length": 4859,
        "ordinal": 6,
        "sequence_sha256": "431260ea39e9618e6c92288c22dba5f5bf323d700eb430216a85bc1112d7beed"
      },
      {
        "header": "CP056725.1 Enterobacter hormaechei strain RHBSTW-00333 plasmid pRHBSTW-00333_7, complete sequence",
        "length": 4783,
        "ordinal": 7,
        "sequence_sha256": "0ff664c6da035241586cc66e2fb18b6f03025f0dacd0e95d6c7af9dff25d08bf"
      },
      {
        "header": "CP056726.1 Enterobacter hormaechei strain RHBSTW-00333 plasmid pRHBSTW-00333_8, complete sequence",
        "length": 2494,
        "ordinal": 8,
        "sequence_sha256": "6c89fad30cebe06bc0f4d53f3983605e4429f86966bdc24a52317b4d1d6d9cfb"
      }
    ],
    "reference_package_sha256": "f7c82d8e912fdb08aec93b190316f482fd462b3c514c5b374f8c694af1278e28",
    "sample_name": "RHBSTW-00333",
    "sequence_scope": "whole_assembly_as_supplied",
    "source": {
      "kind": "positional"
    },
    "total_bases": 5215023,
    "verification": "query_bytes_hashed; reference_package_verified"
  },
  "legacy_v1_result": {
    "assignment_reason": "conditional_assembly_assignment",
    "policy_id": "conservative-assembly-v1",
    "reasons": [],
    "species_id": "ECTX-SP025",
    "species_name": "Enterobacter xiangfangensis",
    "status": "assigned",
    "subspecies_id": "ECTX-SS007",
    "subspecies_name": "Enterobacter xiangfangensis subsp. hoffmannii",
    "subspecies_reason": "diagnostic_candidate_only"
  },
  "max_skani_ani_percent": 100.0,
  "measurement": {
    "engine_profile": "skani-0.3.2-avx2-content-order-dna-v2",
    "engine_revision": "22da4ae9e44b2e3e686c8e5c71fcd16cec2b9791",
    "engine_version": "0.3.2",
    "not_returned_reference_files": [],
    "reporting_floor_percent": 15,
    "rows": [
      {
        "af_query": 99.99,
        "af_reference": 99.99,
        "ani": 100.00,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_013738375.1.fna"
      },
      {
        "af_query": 82.69,
        "af_reference": 92.17,
        "ani": 98.97,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP017186.1 Enterobacter hormaechei subsp. hoffmannii strain DSM 14563 chromosome, complete sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_001729745.1.fna"
      },
      {
        "af_query": 85.66,
        "af_reference": 90.75,
        "ani": 98.97,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP058157.1 Enterobacter hormaechei strain RHBSTW-00086 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_013625435.1.fna"
      },
      {
        "af_query": 85.51,
        "af_reference": 91.21,
        "ani": 98.97,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CM128657.1 Enterobacter sp. CCM 8629 strain CCM_8629 chromosome, complete sequence, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_052922205.1.fna"
      },
      {
        "af_query": 83.07,
        "af_reference": 90.16,
        "ani": 98.92,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP096923.1 Enterobacter hormaechei strain NY0401 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_027595125.1.fna"
      },
      {
        "af_query": 83.56,
        "af_reference": 89.63,
        "ani": 98.88,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "JBBMFH010000001.1 Enterobacter intestinihominis strain CLA-AC-H004 CLA-AC-H004_contig_1_length_435703, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_040096145.1.fna"
      },
      {
        "af_query": 84.38,
        "af_reference": 86.96,
        "ani": 98.61,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CM128643.1 Enterobacter sp. CCM 8630 strain CCM_8630 chromosome, complete sequence, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_052921675.1.fna"
      },
      {
        "af_query": 85.41,
        "af_reference": 86.58,
        "ani": 98.60,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP034754.1 Enterobacter hormaechei subsp. hoffmannii strain Eh1 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_009834325.1.fna"
      },
      {
        "af_query": 81.75,
        "af_reference": 87.21,
        "ani": 96.08,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP056155.1 Enterobacter hormaechei strain RHBSTW-00844 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_013731155.1.fna"
      },
      {
        "af_query": 80.09,
        "af_reference": 86.85,
        "ani": 95.89,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP056747.1 Enterobacter hormaechei strain RHBSTW-00217 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_013743755.1.fna"
      },
      {
        "af_query": 78.60,
        "af_reference": 84.53,
        "ani": 95.77,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP056132.1 Enterobacter hormaechei strain RHBSTW-00916 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_013726395.1.fna"
      },
      {
        "af_query": 75.89,
        "af_reference": 80.84,
        "ani": 95.77,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP135594.1 Enterobacter sp. DTU_2021_1002640_1_SI_PRY_ASU_LCPMC_013 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_032389435.1.fna"
      },
      {
        "af_query": 78.83,
        "af_reference": 87.02,
        "ani": 95.75,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP017180.1 Enterobacter hormaechei subsp. oharae strain DSM 16687, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_001729705.1.fna"
      },
      {
        "af_query": 79.95,
        "af_reference": 85.91,
        "ani": 95.75,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP056742.1 Enterobacter hormaechei strain RHBSTW-00220 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_013743295.1.fna"
      },
      {
        "af_query": 80.45,
        "af_reference": 83.23,
        "ani": 95.74,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP021902.1 Enterobacter cloacae complex sp. strain AR_0136 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_002204775.1.fna"
      },
      {
        "af_query": 77.80,
        "af_reference": 83.39,
        "ani": 95.74,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP104471.1 Enterobacter hormaechei strain 80014967 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_025369895.1.fna"
      },
      {
        "af_query": 79.60,
        "af_reference": 84.97,
        "ani": 95.74,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP126878.1 Enterobacter hormaechei strain Ehh_21 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_030848005.1.fna"
      },
      {
        "af_query": 78.22,
        "af_reference": 87.50,
        "ani": 95.72,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP017183.1 Enterobacter hormaechei subsp. xiangfangensis strain LMG27195 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_001729785.1.fna"
      },
      {
        "af_query": 78.02,
        "af_reference": 84.78,
        "ani": 95.64,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP175755.1 Enterobacter hormaechei subsp. xiangfangensis strain NY14244 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_051092005.1.fna"
      },
      {
        "af_query": 79.87,
        "af_reference": 83.21,
        "ani": 95.64,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CM132286.1 Enterobacter hormaechei strain 16AR1296 chromosome, complete sequence, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_053699795.1.fna"
      },
      {
        "af_query": 79.88,
        "af_reference": 83.61,
        "ani": 95.52,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP175751.1 Enterobacter hormaechei subsp. xiangfangensis strain NY14234 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_051091715.1.fna"
      },
      {
        "af_query": 80.08,
        "af_reference": 82.60,
        "ani": 95.51,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CM130044.1 Enterobacter hormaechei strain EB00148 chromosome, complete sequence, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_030411255.2.fna"
      },
      {
        "af_query": 77.98,
        "af_reference": 85.04,
        "ani": 95.49,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP017179.1 Enterobacter hormaechei subsp. steigerwaltii strain DSM 16691, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_001729725.1.fna"
      },
      {
        "af_query": 77.28,
        "af_reference": 82.75,
        "ani": 95.48,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CM142177.1 Enterobacter hormaechei strain BZHJ2 chromosome, complete sequence, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_054871305.1.fna"
      },
      {
        "af_query": 81.37,
        "af_reference": 81.15,
        "ani": 95.40,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP143654.1 Enterobacter hormaechei subsp. xiangfangensis strain ECC-257 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_043965205.1.fna"
      },
      {
        "af_query": 79.31,
        "af_reference": 77.13,
        "ani": 95.40,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP175625.1 Enterobacter hormaechei strain NY1461 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_046097115.1.fna"
      },
      {
        "af_query": 78.82,
        "af_reference": 79.26,
        "ani": 95.39,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP174601.1 Enterobacter hormaechei strain NY2861 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_050871265.1.fna"
      },
      {
        "af_query": 78.47,
        "af_reference": 83.41,
        "ani": 95.35,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP126807.1 Enterobacter hormaechei strain 22KM1314 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_030848125.1.fna"
      },
      {
        "af_query": 78.80,
        "af_reference": 79.90,
        "ani": 95.33,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP136935.1 Enterobacter sp. JJBC chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_036936505.1.fna"
      },
      {
        "af_query": 76.35,
        "af_reference": 81.08,
        "ani": 94.98,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP166433.1 Enterobacter hormaechei strain 2024CK-00699 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_039734725.2.fna"
      },
      {
        "af_query": 75.90,
        "af_reference": 80.52,
        "ani": 94.32,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP077308.1 Enterobacter hormaechei strain FDAARGOS 1433 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_019048245.1.fna"
      },
      {
        "af_query": 75.74,
        "af_reference": 78.51,
        "ani": 94.32,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP173521.1 Enterobacter hormaechei strain 98213 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_045037665.1.fna"
      },
      {
        "af_query": 75.92,
        "af_reference": 83.49,
        "ani": 94.20,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP143756.1 Enterobacter hormaechei strain ECC-026 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_043973395.1.fna"
      },
      {
        "af_query": 74.92,
        "af_reference": 85.93,
        "ani": 94.19,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP134705.1 Enterobacter hormaechei subsp. hormaechei strain Naas 2022_1 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_031852185.1.fna"
      },
      {
        "af_query": 73.98,
        "af_reference": 79.28,
        "ani": 94.09,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CM130032.1 Enterobacter hormaechei strain EB00226 chromosome, complete sequence, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_053349035.1.fna"
      },
      {
        "af_query": 73.61,
        "af_reference": 84.30,
        "ani": 93.76,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "SJON01000001.1 Enterobacter quasihormaechei strain WCHEQ120003 1, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_004331385.1.fna"
      },
      {
        "af_query": 69.25,
        "af_reference": 71.35,
        "ani": 91.50,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP056779.1 Enterobacter pasteurii strain D41-sc-1712200 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_013376835.1.fna"
      },
      {
        "af_query": 68.46,
        "af_reference": 74.14,
        "ani": 91.45,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "JARCHI010000010.1 Enterobacter pasteurii strain A-8 NODE_10_covk_22.303966_covr_63.946_cutoff_34, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_028890245.1.fna"
      },
      {
        "af_query": 55.37,
        "af_reference": 60.75,
        "ani": 89.67,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP110983.1 Enterobacter bugandensis strain E104107 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_031218175.1.fna"
      },
      {
        "af_query": 55.25,
        "af_reference": 60.65,
        "ani": 89.54,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP039452.1 Enterobacter bugandensis strain 1367 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_004804395.1.fna"
      },
      {
        "af_query": 55.69,
        "af_reference": 59.83,
        "ani": 89.51,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP163533.1 Enterobacter bugandensis strain YF-3 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_053165385.1.fna"
      },
      {
        "af_query": 55.70,
        "af_reference": 60.62,
        "ani": 89.48,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP162195.1 Enterobacter chuandaensis strain STK53-E chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_045348695.1.fna"
      },
      {
        "af_query": 55.97,
        "af_reference": 61.35,
        "ani": 89.46,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP143687.1 Enterobacter bugandensis strain ECC-190 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_043967505.1.fna"
      },
      {
        "af_query": 55.62,
        "af_reference": 57.58,
        "ani": 89.43,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP077206.1 Enterobacter bugandensis strain FDAARGOS 1427 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_019046905.1.fna"
      },
      {
        "af_query": 53.36,
        "af_reference": 56.57,
        "ani": 89.41,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP097173.1 Enterobacter chuandaensis strain E20191216 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_039718975.1.fna"
      },
      {
        "af_query": 54.22,
        "af_reference": 54.67,
        "ani": 89.37,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP135253.1 Enterobacter chuandaensis strain FAHZZU5885 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_045278925.1.fna"
      },
      {
        "af_query": 55.64,
        "af_reference": 59.69,
        "ani": 89.35,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CM136145.1 Enterobacter bugandensis strain 20TX0143 chromosome, complete sequence, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_054382355.1.fna"
      },
      {
        "af_query": 54.78,
        "af_reference": 60.84,
        "ani": 89.33,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP143725.1 Enterobacter bugandensis strain ECC-105 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_043970685.1.fna"
      },
      {
        "af_query": 52.52,
        "af_reference": 55.44,
        "ani": 89.29,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CM130037.1 Enterobacter roggenkampii strain EB00178 chromosome, complete sequence, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_030410235.2.fna"
      },
      {
        "af_query": 55.29,
        "af_reference": 59.83,
        "ani": 89.26,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP143681.1 Enterobacter bugandensis strain ECC-209 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_043966825.1.fna"
      },
      {
        "af_query": 54.31,
        "af_reference": 60.15,
        "ani": 89.17,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "JAPKNE010000001.1 Enterobacter nematophilus strain E-TC7 Strain6_1a_1, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_026344075.1.fna"
      },
      {
        "af_query": 57.10,
        "af_reference": 60.96,
        "ani": 89.14,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "OZ345835.1 Enterobacter mori strain R-92920 genome assembly, chromosome: 1",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_977007405.1.fna"
      },
      {
        "af_query": 56.48,
        "af_reference": 60.81,
        "ani": 89.05,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP091779.1 Enterobacter mori strain ACYC.E9L chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_022014715.1.fna"
      },
      {
        "af_query": 51.19,
        "af_reference": 55.55,
        "ani": 89.01,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP011863.1 Enterobacter asburiae strain ATCC 35953, complete sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_001521715.1.fna"
      },
      {
        "af_query": 54.29,
        "af_reference": 57.32,
        "ani": 89.01,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP060733.1 Enterobacter roggenkampii strain Ed-982 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_014490825.1.fna"
      },
      {
        "af_query": 54.24,
        "af_reference": 60.08,
        "ani": 89.00,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "RXRX01000001.1 Enterobacter quasimori strain 090044 1, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_003964905.1.fna"
      },
      {
        "af_query": 50.57,
        "af_reference": 57.00,
        "ani": 88.98,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP056716.1 Enterobacter asburiae strain RHBSTW-00516 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_013784425.1.fna"
      },
      {
        "af_query": 52.83,
        "af_reference": 59.47,
        "ani": 88.97,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "QZCS01000001.1 Enterobacter chuandaensis strain 090028 1, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_003594915.1.fna"
      },
      {
        "af_query": 53.30,
        "af_reference": 55.74,
        "ani": 88.96,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP060737.1 Enterobacter roggenkampii isolate enterobacter cloacae chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_014490845.1.fna"
      },
      {
        "af_query": 53.34,
        "af_reference": 55.19,
        "ani": 88.96,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP128629.1 Enterobacter roggenkampii strain WL110 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_047116295.1.fna"
      },
      {
        "af_query": 55.76,
        "af_reference": 56.70,
        "ani": 88.95,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CM136141.1 Enterobacter mori strain 20WA0184 chromosome, complete sequence, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_054382275.1.fna"
      },
      {
        "af_query": 55.76,
        "af_reference": 60.75,
        "ani": 88.94,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP104285.1 Enterobacter mori strain JT.W3M11 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_025244905.1.fna"
      },
      {
        "af_query": 52.97,
        "af_reference": 52.17,
        "ani": 88.91,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP199517.1 Enterobacter asburiae strain x220589 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_052569525.1.fna"
      },
      {
        "af_query": 50.82,
        "af_reference": 53.49,
        "ani": 88.86,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP045064.2 Enterobacter roggenkampii strain WCHER090065 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_009184765.2.fna"
      },
      {
        "af_query": 55.14,
        "af_reference": 60.32,
        "ani": 88.85,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP195848.1 Enterobacter mori strain RYYT.gf44 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_051517475.1.fna"
      },
      {
        "af_query": 52.25,
        "af_reference": 55.61,
        "ani": 88.84,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP017184.1 Enterobacter roggenkampii strain DSM 16690, complete sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_001729805.1.fna"
      },
      {
        "af_query": 54.07,
        "af_reference": 59.19,
        "ani": 88.81,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP134642.1 Enterobacter asburiae strain 30A:C chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_031851495.1.fna"
      },
      {
        "af_query": 55.34,
        "af_reference": 58.50,
        "ani": 88.78,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP143766.1 Enterobacter mori strain ECC-007 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_043973405.1.fna"
      },
      {
        "af_query": 50.03,
        "af_reference": 57.28,
        "ani": 88.77,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP126604.1 Enterobacter dykesii strain E1 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_008364625.2.fna"
      },
      {
        "af_query": 52.21,
        "af_reference": 56.61,
        "ani": 88.74,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP086201.1 Enterobacter roggenkampii strain F1057 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_021347605.1.fna"
      },
      {
        "af_query": 52.86,
        "af_reference": 56.44,
        "ani": 88.72,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP169395.1 Enterobacter sp. fkY84-4 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_052974775.1.fna"
      },
      {
        "af_query": 51.19,
        "af_reference": 52.78,
        "ani": 88.70,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "AP038752.1 Enterobacter pseudoroggenkampii GVv1 DNA, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_045866555.1.fna"
      },
      {
        "af_query": 49.81,
        "af_reference": 55.42,
        "ani": 88.63,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP034769.1 Enterobacter sp. N18-03635 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_004006055.1.fna"
      },
      {
        "af_query": 51.68,
        "af_reference": 49.26,
        "ani": 88.63,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP074170.1 Enterobacter sp. JBIWA003 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_019968825.1.fna"
      },
      {
        "af_query": 50.14,
        "af_reference": 58.41,
        "ani": 88.62,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "AP019007.1 Enterobacter oligotrophicus CCA6 DNA, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_009176645.1.fna"
      },
      {
        "af_query": 49.88,
        "af_reference": 54.99,
        "ani": 88.60,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP129026.1 Enterobacter pseudoroggenkampii strain FY158 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_030406165.1.fna"
      },
      {
        "af_query": 52.69,
        "af_reference": 53.75,
        "ani": 88.59,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "AP026886.1 Enterobacter asburiae KAM576 DNA, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_025999975.1.fna"
      },
      {
        "af_query": 52.03,
        "af_reference": 54.53,
        "ani": 88.59,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CM132278.1 Enterobacter kobei strain 19AR1162 chromosome, complete sequence, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_053699365.1.fna"
      },
      {
        "af_query": 50.28,
        "af_reference": 58.68,
        "ani": 88.58,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP162152.1 Enterobacter vonholyi strain STK80-C chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_040834095.1.fna"
      },
      {
        "af_query": 49.82,
        "af_reference": 52.73,
        "ani": 88.56,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP017181.1 Enterobacter kobei strain DSM 13645 chromosome, complete sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_001729765.1.fna"
      },
      {
        "af_query": 51.82,
        "af_reference": 54.79,
        "ani": 88.56,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP193790.1 Enterobacter wuhouensis strain TMH.P3 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_050847275.1.fna"
      },
      {
        "af_query": 51.77,
        "af_reference": 50.31,
        "ani": 88.55,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP042578.1 Enterobacter kobei strain C16 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_008931545.1.fna"
      },
      {
        "af_query": 50.27,
        "af_reference": 50.24,
        "ani": 88.54,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP043318.1 Enterobacter chengduensis strain WCHECl-C4 = WCHECh050004 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_001984825.2.fna"
      },
      {
        "af_query": 51.02,
        "af_reference": 56.29,
        "ani": 88.54,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP143745.1 Enterobacter quasiroggenkampii strain ECC-072 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_043972695.1.fna"
      },
      {
        "af_query": 49.50,
        "af_reference": 54.75,
        "ani": 88.54,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP133814.1 Enterobacter kobei strain EK1918 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_045278755.1.fna"
      },
      {
        "af_query": 51.80,
        "af_reference": 56.11,
        "ani": 88.53,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP129025.1 Enterobacter pseudoroggenkampii strain SC1 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_030406125.1.fna"
      },
      {
        "af_query": 52.44,
        "af_reference": 56.72,
        "ani": 88.53,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP142124.1 Enterobacter wuhouensis strain AV1 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_035835995.1.fna"
      },
      {
        "af_query": 51.06,
        "af_reference": 56.50,
        "ani": 88.52,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP110533.1 Enterobacter quasiroggenkampii strain WS12-3 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_029542725.1.fna"
      },
      {
        "af_query": 50.90,
        "af_reference": 57.83,
        "ani": 88.51,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP037919.1 Enterobacter cloacae complex sp. strain N13-01531 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_004355165.1.fna"
      },
      {
        "af_query": 51.32,
        "af_reference": 56.88,
        "ani": 88.51,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP157375.1 Enterobacter cloacae complex sp. Mu1197 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_040059225.1.fna"
      },
      {
        "af_query": 51.36,
        "af_reference": 52.64,
        "ani": 88.51,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP143738.1 Enterobacter chengduensis strain ECC-093 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_043971375.1.fna"
      },
      {
        "af_query": 50.14,
        "af_reference": 54.40,
        "ani": 88.50,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "LFDQ02000010.1 Enterobacter quasiroggenkampii strain WCHECL1060 NODE_10_length_82615_cov_44.405, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_001039365.2.fna"
      },
      {
        "af_query": 50.97,
        "af_reference": 55.24,
        "ani": 88.49,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "AP019634.1 Enterobacter sp. 18A13 DNA, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_007035975.1.fna"
      },
      {
        "af_query": 53.51,
        "af_reference": 55.39,
        "ani": 88.48,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP043342.1 Enterobacter huaxiensis strain 090008 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_003594935.2.fna"
      },
      {
        "af_query": 52.63,
        "af_reference": 56.26,
        "ani": 88.48,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP149853.1 Enterobacter asburiae strain 2024CK-00035 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_035556915.2.fna"
      },
      {
        "af_query": 51.20,
        "af_reference": 51.68,
        "ani": 88.47,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP032897.1 Enterobacter kobei strain WCHEK045523 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_003665375.1.fna"
      },
      {
        "af_query": 49.62,
        "af_reference": 51.55,
        "ani": 88.47,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP074159.1 Enterobacter sp. JBIWA005 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_019968805.1.fna"
      },
      {
        "af_query": 52.83,
        "af_reference": 55.55,
        "ani": 88.46,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "GL890773.1 Enterobacter mori LMG 25706 genomic scaffold ENTMO1_scaffold1, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_000211415.1.fna"
      },
      {
        "af_query": 49.80,
        "af_reference": 52.53,
        "ani": 88.46,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CM132264.1 Enterobacter kobei strain 22AR0121 chromosome, complete sequence, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_053698735.1.fna"
      },
      {
        "af_query": 51.49,
        "af_reference": 54.75,
        "ani": 88.45,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP174016.1 Enterobacter asburiae strain 2023CK-01510 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_034331165.2.fna"
      },
      {
        "af_query": 51.01,
        "af_reference": 54.36,
        "ani": 88.43,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "SJOO01000001.1 Enterobacter wuhouensis strain WCHEW120002 1, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_004331265.1.fna"
      },
      {
        "af_query": 50.84,
        "af_reference": 49.09,
        "ani": 88.43,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "AP022498.1 Enterobacter kobei STN0717-53 DNA, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_015137465.1.fna"
      },
      {
        "af_query": 50.41,
        "af_reference": 48.57,
        "ani": 88.41,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "AP022446.1 Enterobacter kobei STW0522-60 DNA, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_015135855.1.fna"
      },
      {
        "af_query": 50.54,
        "af_reference": 53.29,
        "ani": 88.41,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "JARDVK010000001.1 Enterobacter rongchengensis strain 170250 contig00001, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_034008275.1.fna"
      },
      {
        "af_query": 51.28,
        "af_reference": 55.41,
        "ani": 88.39,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP025034.2 Enterobacter sp. SGAir0187 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_002952735.2.fna"
      },
      {
        "af_query": 51.03,
        "af_reference": 54.70,
        "ani": 88.38,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "JAPMLV010000001.1 Enterobacter pseudoroggenkampii strain 155092 contig00001, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_026420145.1.fna"
      },
      {
        "af_query": 49.73,
        "af_reference": 56.24,
        "ani": 88.37,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP117838.1 Enterobacter sp. S-33 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_028735835.1.fna"
      },
      {
        "af_query": 47.26,
        "af_reference": 50.41,
        "ani": 88.34,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "POVL01000001.1 Enterobacter sichuanensis strain WCHECL1597 1, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_002939185.1.fna"
      },
      {
        "af_query": 52.53,
        "af_reference": 48.93,
        "ani": 88.33,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP001918.1 Enterobacter cloacae subsp. cloacae ATCC 13047, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_000025565.1.fna"
      },
      {
        "af_query": 49.60,
        "af_reference": 56.35,
        "ani": 88.27,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "VTUC01000008.1 Enterobacter vonholyi strain E13 NODE_10_length_141926_cov_60.4185, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_008364555.1.fna"
      },
      {
        "af_query": 48.59,
        "af_reference": 50.58,
        "ani": 88.26,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP143650.1 Enterobacter sichuanensis strain ECC-263 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_043964395.1.fna"
      },
      {
        "af_query": 51.29,
        "af_reference": 48.38,
        "ani": 88.23,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CM132256.1 Enterobacter cloacae strain 20AR0121 chromosome, complete sequence, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_053691555.1.fna"
      },
      {
        "af_query": 48.02,
        "af_reference": 50.74,
        "ani": 88.14,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP170190.1 Enterobacter sichuanensis strain B36 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_042434935.1.fna"
      },
      {
        "af_query": 47.35,
        "af_reference": 52.41,
        "ani": 88.12,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP027986.1 Enterobacter sichuanensis strain SGAir0282 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_009036245.1.fna"
      },
      {
        "af_query": 49.60,
        "af_reference": 52.59,
        "ani": 88.02,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP085080.1 Enterobacter cloacae strain ECl_1.VN chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_020540925.1.fna"
      },
      {
        "af_query": 50.26,
        "af_reference": 53.44,
        "ani": 88.01,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CM130310.1 Enterobacter cloacae strain 2024HL-01377 chromosome, complete sequence, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_046015535.2.fna"
      },
      {
        "af_query": 50.14,
        "af_reference": 49.78,
        "ani": 88.00,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP143746.1 Enterobacter cloacae subsp. dissolvens strain ECC-068 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_043972705.1.fna"
      },
      {
        "af_query": 49.10,
        "af_reference": 52.85,
        "ani": 87.99,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "JARDVI010000001.1 Enterobacter chinensis strain 170198 contig00001, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_034008295.1.fna"
      },
      {
        "af_query": 49.47,
        "af_reference": 52.10,
        "ani": 87.97,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP102246.1 Enterobacter cloacae complex sp. R_G8 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_024599795.1.fna"
      },
      {
        "af_query": 49.51,
        "af_reference": 51.97,
        "ani": 87.95,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP003678.1 Enterobacter cloacae subsp. dissolvens SDM, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_000235765.3.fna"
      },
      {
        "af_query": 49.24,
        "af_reference": 53.07,
        "ani": 87.91,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "WJWQ01000001.1 Enterobacter cloacae subsp. dissolvens strain ATCC 23373 contig00001, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_009660455.1.fna"
      },
      {
        "af_query": 49.01,
        "af_reference": 53.24,
        "ani": 87.90,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP162156.1 Enterobacter cloacae strain STK49-C chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_040892575.1.fna"
      },
      {
        "af_query": 49.58,
        "af_reference": 53.26,
        "ani": 87.89,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP134674.1 Enterobacter cloacae strain 99183042147 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_031851625.1.fna"
      },
      {
        "af_query": 50.18,
        "af_reference": 52.28,
        "ani": 87.87,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP045487.1 Enterobacter cloacae strain 14240244101 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_016864115.1.fna"
      },
      {
        "af_query": 50.35,
        "af_reference": 51.61,
        "ani": 87.85,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP017475.1 Enterobacter cloacae strain M12X01451 chromosome complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_002303275.1.fna"
      },
      {
        "af_query": 51.45,
        "af_reference": 53.41,
        "ani": 87.84,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "OW968328.1 Enterobacter cloacae isolate 1382 genome assembly, chromosome: main",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_905331265.2.fna"
      },
      {
        "af_query": 43.41,
        "af_reference": 46.82,
        "ani": 87.77,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP083824.1 Enterobacter ludwigii strain 11894-yvys chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_023023105.1.fna"
      },
      {
        "af_query": 47.09,
        "af_reference": 50.52,
        "ani": 87.67,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP174015.1 Enterobacter ludwigii strain 2024CK-01663 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_043647335.2.fna"
      },
      {
        "af_query": 46.35,
        "af_reference": 48.83,
        "ani": 87.58,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP133410.1 Enterobacter ludwigii strain AG32E chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_035323105.1.fna"
      },
      {
        "af_query": 45.84,
        "af_reference": 49.58,
        "ani": 87.55,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP077290.1 Enterobacter cancerogenus strain FDAARGOS 1428 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_019047785.1.fna"
      },
      {
        "af_query": 46.99,
        "af_reference": 49.17,
        "ani": 87.54,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP192448.1 Enterobacter ludwigii strain 4b24 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_050626905.1.fna"
      },
      {
        "af_query": 46.59,
        "af_reference": 49.06,
        "ani": 87.52,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP017279.1 Enterobacter ludwigii strain EN-119 chromosome, complete sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_001750725.1.fna"
      },
      {
        "af_query": 44.30,
        "af_reference": 48.16,
        "ani": 87.47,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP025225.1 Enterobacter cancerogenus strain CR-Eb1 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_002850575.1.fna"
      },
      {
        "af_query": 46.34,
        "af_reference": 48.36,
        "ani": 87.47,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP134649.1 Enterobacter ludwigii strain 51A:C chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_031851515.1.fna"
      },
      {
        "af_query": 45.96,
        "af_reference": 51.13,
        "ani": 87.41,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP099310.1 Enterobacter ludwigii strain RHB28-E3-C01 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_029718255.1.fna"
      },
      {
        "af_query": 45.84,
        "af_reference": 49.29,
        "ani": 87.34,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP028950.1 Enterobacter cloacae complex sp. FDA-CDC-AR_0164 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_003071645.1.fna"
      },
      {
        "af_query": 46.83,
        "af_reference": 49.78,
        "ani": 87.34,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP099325.1 Enterobacter ludwigii strain RHB47-SO-C01 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_029721015.1.fna"
      },
      {
        "af_query": 44.35,
        "af_reference": 46.87,
        "ani": 87.27,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "LR881936.1 Enterobacter cancerogenus strain UPC1 genome assembly, chromosome: UPC1",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_904425455.1.fna"
      },
      {
        "af_query": 40.54,
        "af_reference": 43.22,
        "ani": 86.90,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "CP104014.1 Enterobacter sp. CP102 chromosome, complete genome",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_025152625.1.fna"
      },
      {
        "af_query": 40.65,
        "af_reference": 42.75,
        "ani": 86.27,
        "query_contig": "CP056719.1 Enterobacter hormaechei strain RHBSTW-00333 chromosome, complete genome",
        "reference_contig": "LXES01000001.1 Enterobacter soli ATCC BAA-2102 Sequence00001, whole genome shotgun sequence",
        "reference_file": "/enterobacter-reference/sequences/primary_whole/GCA_001654845.1.fna"
      }
    ],
    "screen_percent": 80,
    "settings": "primary",
    "sketched_bases": 5215023,
    "total_input_bases": 5215023
  },
  "method_diagnostics": [],
  "mlst": {
    "alleles": {
      "dnaA": "59",
      "fusA": "64",
      "gyrB": "81",
      "leuS": "9",
      "pyrG": "79",
      "rplB": "37",
      "rpoB": "38"
    },
    "candidate_is_reported_ST": false,
    "comparator_style": {
      "SCORE": 100,
      "ST": "286",
      "STATUS": "PERFECT"
    },
    "copy_diagnostic_reasons": [],
    "database": {
      "allele_count": 4751,
      "complete_through_cutoff_independently_established": false,
      "cutoff_evidence": "Primary server explicitly restricts anonymous scheme and all seven locus exports to records submitted on or prior to 2024-12-31",
      "data_sha256": {
        "pubmlst/ecloacae/dnaA.tfa": "cb78a1c22e209d58e4399909fa7a7cc26f3def2c7c83ee5a4c2441f2a7a92b2a",
        "pubmlst/ecloacae/ecloacae.txt": "ea08c616718901d21ae96b6c5af78747b9f160697112a886fc9e68d7333046af",
        "pubmlst/ecloacae/fusA.tfa": "c93c4f044bc615f6b8b3506a103852ef7d2a1bf9336bcc2b27a785091b5227a8",
        "pubmlst/ecloacae/gyrB.tfa": "20b0985b1ab7d10a94ec51bc081616d3789f4dec4293642c01b7927c01677ff8",
        "pubmlst/ecloacae/leuS.tfa": "5d29f152cc9050dad4a50a74bbac5ba5477be7620632d32b2773fec728ff9b50",
        "pubmlst/ecloacae/pyrG.tfa": "aa29aae067f04bef8e552cae870d8794224c09f3fdd73bdc395f9deb77678207",
        "pubmlst/ecloacae/rplB.tfa": "b6b37cd3b396fa3e449ca60e0347bed82eb92318b5cc1461b4b05284173aed3f",
        "pubmlst/ecloacae/rpoB.tfa": "8ba6f160a52019e6a337e0648d2cf731f570947002950e4008f5072f2cfec015"
      },
      "data_terms_url": "https://pubmlst.org/terms-conditions",
      "limitation": "Bundled MLST database: limited to PubMLST records submitted on or before 31 December 2024. Alleles, ST profiles and schemes submitted from 1 January 2025 onward are not included. Unmatched profiles may therefore correspond to STs described after this cutoff.",
      "loci": [
        "dnaA",
        "fusA",
        "gyrB",
        "leuS",
        "pyrG",
        "rplB",
        "rpoB"
      ],
      "package_id": "enterobacter-pubmlst-pre2025-retrieved-20261006",
      "package_manifest_sha256": "0f0a4bd051e7a29d97f530a38982026df10ca223805e7b0147b19796763978dd",
      "post_cutoff_currency": "not_claimed",
      "profile_count": 3291,
      "retrieved_utc": "2026-10-05T22:48:14.036646+00:00",
      "scheme": "ecloacae",
      "scheme_description": "Enterobacter spp. seven-locus MLST",
      "sequence_state": "2026 retrieval of anonymously accessible pre-2025-submission records; not a 2024 byte snapshot",
      "source_urls": {
        "pubmlst/ecloacae/dnaA.tfa": "https://rest.pubmlst.org/db/pubmlst_ecloacae_seqdef/loci/dnaA/alleles_fasta",
        "pubmlst/ecloacae/ecloacae.txt": "https://rest.pubmlst.org/db/pubmlst_ecloacae_seqdef/schemes/1/profiles_csv",
        "pubmlst/ecloacae/fusA.tfa": "https://rest.pubmlst.org/db/pubmlst_ecloacae_seqdef/loci/fusA/alleles_fasta",
        "pubmlst/ecloacae/gyrB.tfa": "https://rest.pubmlst.org/db/pubmlst_ecloacae_seqdef/loci/gyrB/alleles_fasta",
        "pubmlst/ecloacae/leuS.tfa": "https://rest.pubmlst.org/db/pubmlst_ecloacae_seqdef/loci/leuS/alleles_fasta",
        "pubmlst/ecloacae/pyrG.tfa": "https://rest.pubmlst.org/db/pubmlst_ecloacae_seqdef/loci/pyrG/alleles_fasta",
        "pubmlst/ecloacae/rplB.tfa": "https://rest.pubmlst.org/db/pubmlst_ecloacae_seqdef/loci/rplB/alleles_fasta",
        "pubmlst/ecloacae/rpoB.tfa": "https://rest.pubmlst.org/db/pubmlst_ecloacae_seqdef/loci/rpoB/alleles_fasta"
      },
      "submission_cutoff": "2024-12-31"
    },
    "discordant_exact_allele_loci": [],
    "engine": {
      "comparator": {
        "name": "mlst 2.32.2 with BLAST+ 2.16.0",
        "relation": "rules reproduced on development fixtures; comparator not executed"
      },
      "implementation": {
        "name": "pterobacter",
        "version": "0.0.0"
      },
      "method": "exact 32-mer seeds with ungapped X-drop extension",
      "name": "terobacter-ungapped-mlst",
      "profile": {
        "ambiguous_bases": "mismatch",
        "evalue": "1e-20",
        "min_coverage_percent": 50,
        "min_identity_percent": 95,
        "penalty": -2,
        "reward": 1,
        "word_size": 32,
        "xdrop_raw": 13
      },
      "version": "1"
    },
    "input_kind": "assembly",
    "location_verification": "exact_locations_checked_against_the_hashed_query_sequence",
    "loci": [
      {
        "locus": "dnaA",
        "raw_token": "59",
        "reported_allele_ids": [
          "59"
        ],
        "reported_ids_are_exact": true,
        "sequence_verified_exact_locations": [
          {
            "allele_id": "59",
            "end_1based_inclusive": 1122,
            "record_id": "CP056719.1",
            "start_1based": 681,
            "strand": "plus"
          }
        ],
        "state": "single_exact_allele"
      },
      {
        "locus": "fusA",
        "raw_token": "64",
        "reported_allele_ids": [
          "64"
        ],
        "reported_ids_are_exact": true,
        "sequence_verified_exact_locations": [
          {
            "allele_id": "64",
            "end_1based_inclusive": 4503317,
            "record_id": "CP056719.1",
            "start_1based": 4502672,
            "strand": "minus"
          }
        ],
        "state": "single_exact_allele"
      },
      {
        "locus": "gyrB",
        "raw_token": "81",
        "reported_allele_ids": [
          "81"
        ],
        "reported_ids_are_exact": true,
        "sequence_verified_exact_locations": [
          {
            "allele_id": "81",
            "end_1based_inclusive": 4790,
            "record_id": "CP056719.1",
            "start_1based": 4357,
            "strand": "plus"
          }
        ],
        "state": "single_exact_allele"
      },
      {
        "locus": "leuS",
        "raw_token": "9",
        "reported_allele_ids": [
          "9"
        ],
        "reported_ids_are_exact": true,
        "sequence_verified_exact_locations": [
          {
            "allele_id": "9",
            "end_1based_inclusive": 1352788,
            "record_id": "CP056719.1",
            "start_1based": 1352211,
            "strand": "minus"
          }
        ],
        "state": "single_exact_allele"
      },
      {
        "locus": "pyrG",
        "raw_token": "79",
        "reported_allele_ids": [
          "79"
        ],
        "reported_ids_are_exact": true,
        "sequence_verified_exact_locations": [
          {
            "allele_id": "79",
            "end_1based_inclusive": 1955632,
            "record_id": "CP056719.1",
            "start_1based": 1955374,
            "strand": "plus"
          }
        ],
        "state": "single_exact_allele"
      },
      {
        "locus": "rplB",
        "raw_token": "37",
        "reported_allele_ids": [
          "37"
        ],
        "reported_ids_are_exact": true,
        "sequence_verified_exact_locations": [
          {
            "allele_id": "37",
            "end_1based_inclusive": 4496628,
            "record_id": "CP056719.1",
            "start_1based": 4496022,
            "strand": "minus"
          }
        ],
        "state": "single_exact_allele"
      },
      {
        "locus": "rpoB",
        "raw_token": "38",
        "reported_allele_ids": [
          "38"
        ],
        "reported_ids_are_exact": true,
        "sequence_verified_exact_locations": [
          {
            "allele_id": "38",
            "end_1based_inclusive": 240722,
            "record_id": "CP056719.1",
            "start_1based": 240178,
            "strand": "plus"
          }
        ],
        "state": "single_exact_allele"
      }
    ],
    "multiple_ids_same_sequence_loci": [],
    "profile_compatible_candidate_ST": null,
    "query_sha256": "603ed679732e01cb7d1a06ec73d89a53fc12b6f6b22f071df5dee866cdf982b9",
    "repeated_same_allele_loci": [],
    "requested": true,
    "schema": "terobacter.mlst/1",
    "scheme": "ecloacae",
    "scheme_routing": "explicitly_selected; applicability_not_established_by_ST",
    "sequence_scope": "whole_assembly_as_supplied",
    "sequence_type": "286",
    "state": "exact_profile_match",
    "status": "complete",
    "taxonomic_assignment_performed": false,
    "typing_role": "supplementary; does not establish genus, species, subspecies, lineage or genomovar",
    "unconfirmed_repeated_hit_loci": []
  },
  "nearest_parent": null,
  "panel_summary": [
    {
      "anim_unmeasured_reference_count": 30,
      "best_skani_ani_percent": 100.0,
      "best_skani_reference_ids": [
        "primary_whole:GCA_013738375.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": true,
      "panel_reference_count": 30,
      "parent": {
        "concept_id": "ECTX-SP025",
        "kind": "species"
      },
      "returned_reference_count": 30
    },
    {
      "anim_unmeasured_reference_count": 5,
      "best_skani_ani_percent": 94.32,
      "best_skani_reference_ids": [
        "primary_whole:GCA_019048245.1",
        "primary_whole:GCA_045037665.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 5,
      "parent": {
        "concept_id": "ECTX-SP009",
        "kind": "species"
      },
      "returned_reference_count": 5
    },
    {
      "anim_unmeasured_reference_count": 1,
      "best_skani_ani_percent": 93.76,
      "best_skani_reference_ids": [
        "primary_whole:GCA_004331385.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 1,
      "parent": {
        "concept_id": "ECTX-SP018",
        "kind": "species"
      },
      "returned_reference_count": 1
    },
    {
      "anim_unmeasured_reference_count": 2,
      "best_skani_ani_percent": 91.5,
      "best_skani_reference_ids": [
        "primary_whole:GCA_013376835.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 2,
      "parent": {
        "concept_id": "ECTX-SP016",
        "kind": "species"
      },
      "returned_reference_count": 2
    },
    {
      "anim_unmeasured_reference_count": 8,
      "best_skani_ani_percent": 89.67,
      "best_skani_reference_ids": [
        "primary_whole:GCA_031218175.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 8,
      "parent": {
        "concept_id": "ECTX-SP003",
        "kind": "species"
      },
      "returned_reference_count": 8
    },
    {
      "anim_unmeasured_reference_count": 4,
      "best_skani_ani_percent": 89.48,
      "best_skani_reference_ids": [
        "primary_whole:GCA_045348695.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 4,
      "parent": {
        "concept_id": "ECTX-SP007",
        "kind": "species"
      },
      "returned_reference_count": 4
    },
    {
      "anim_unmeasured_reference_count": 14,
      "best_skani_ani_percent": 89.29,
      "best_skani_reference_ids": [
        "primary_whole:GCA_030410235.2"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 14,
      "parent": {
        "concept_id": "ECTX-SP019",
        "kind": "species"
      },
      "returned_reference_count": 14
    },
    {
      "anim_unmeasured_reference_count": 1,
      "best_skani_ani_percent": 89.17,
      "best_skani_reference_ids": [
        "primary_whole:GCA_026344075.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 1,
      "parent": {
        "concept_id": "ECTX-SP014",
        "kind": "species"
      },
      "returned_reference_count": 1
    },
    {
      "anim_unmeasured_reference_count": 8,
      "best_skani_ani_percent": 89.14,
      "best_skani_reference_ids": [
        "primary_whole:GCA_977007405.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 8,
      "parent": {
        "concept_id": "ECTX-SP013",
        "kind": "species"
      },
      "returned_reference_count": 8
    },
    {
      "anim_unmeasured_reference_count": 8,
      "best_skani_ani_percent": 89.01,
      "best_skani_reference_ids": [
        "primary_whole:GCA_001521715.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 8,
      "parent": {
        "concept_id": "ECTX-SP002",
        "kind": "species"
      },
      "returned_reference_count": 8
    },
    {
      "anim_unmeasured_reference_count": 4,
      "best_skani_ani_percent": 88.7,
      "best_skani_reference_ids": [
        "primary_whole:GCA_045866555.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 4,
      "parent": {
        "concept_id": "ECTX-SP017",
        "kind": "species"
      },
      "returned_reference_count": 4
    },
    {
      "anim_unmeasured_reference_count": 7,
      "best_skani_ani_percent": 88.63,
      "best_skani_reference_ids": [
        "primary_whole:GCA_004006055.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 7,
      "parent": {
        "concept_id": "ECTX-SP023",
        "kind": "species"
      },
      "returned_reference_count": 7
    },
    {
      "anim_unmeasured_reference_count": 1,
      "best_skani_ani_percent": 88.62,
      "best_skani_reference_ids": [
        "primary_whole:GCA_009176645.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 1,
      "parent": {
        "concept_id": "ECTX-SP015",
        "kind": "species"
      },
      "returned_reference_count": 1
    },
    {
      "anim_unmeasured_reference_count": 8,
      "best_skani_ani_percent": 88.59,
      "best_skani_reference_ids": [
        "primary_whole:GCA_053699365.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 8,
      "parent": {
        "concept_id": "ECTX-SP011",
        "kind": "species"
      },
      "returned_reference_count": 8
    },
    {
      "anim_unmeasured_reference_count": 3,
      "best_skani_ani_percent": 88.56,
      "best_skani_reference_ids": [
        "primary_whole:GCA_050847275.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 3,
      "parent": {
        "concept_id": "ECTX-SP024",
        "kind": "species"
      },
      "returned_reference_count": 3
    },
    {
      "anim_unmeasured_reference_count": 3,
      "best_skani_ani_percent": 88.54,
      "best_skani_reference_ids": [
        "primary_whole:GCA_001984825.2"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 3,
      "parent": {
        "concept_id": "ECTX-SP005",
        "kind": "species"
      },
      "returned_reference_count": 3
    },
    {
      "anim_unmeasured_reference_count": 1,
      "best_skani_ani_percent": 88.48,
      "best_skani_reference_ids": [
        "primary_whole:GCA_003594935.2"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 1,
      "parent": {
        "concept_id": "ECTX-SP010",
        "kind": "species"
      },
      "returned_reference_count": 1
    },
    {
      "anim_unmeasured_reference_count": 4,
      "best_skani_ani_percent": 88.34,
      "best_skani_reference_ids": [
        "primary_whole:GCA_002939185.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 4,
      "parent": {
        "concept_id": "ECTX-SP021",
        "kind": "species"
      },
      "returned_reference_count": 4
    },
    {
      "anim_unmeasured_reference_count": 13,
      "best_skani_ani_percent": 88.33,
      "best_skani_reference_ids": [
        "primary_whole:GCA_000025565.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 13,
      "parent": {
        "concept_id": "ECTX-SP008",
        "kind": "species"
      },
      "returned_reference_count": 13
    },
    {
      "anim_unmeasured_reference_count": 1,
      "best_skani_ani_percent": 87.99,
      "best_skani_reference_ids": [
        "primary_whole:GCA_034008295.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 1,
      "parent": {
        "concept_id": "ECTX-SP006",
        "kind": "species"
      },
      "returned_reference_count": 1
    },
    {
      "anim_unmeasured_reference_count": 1,
      "best_skani_ani_percent": 87.77,
      "best_skani_reference_ids": [
        "primary_whole:GCA_023023105.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 1,
      "parent": {
        "concept_id": "ECTX-SP001",
        "kind": "species"
      },
      "returned_reference_count": 1
    },
    {
      "anim_unmeasured_reference_count": 8,
      "best_skani_ani_percent": 87.67,
      "best_skani_reference_ids": [
        "primary_whole:GCA_043647335.2"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 8,
      "parent": {
        "concept_id": "ECTX-SP012",
        "kind": "species"
      },
      "returned_reference_count": 8
    },
    {
      "anim_unmeasured_reference_count": 3,
      "best_skani_ani_percent": 87.55,
      "best_skani_reference_ids": [
        "primary_whole:GCA_019047785.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 3,
      "parent": {
        "concept_id": "ECTX-SP004",
        "kind": "species"
      },
      "returned_reference_count": 3
    },
    {
      "anim_unmeasured_reference_count": 2,
      "best_skani_ani_percent": 86.9,
      "best_skani_reference_ids": [
        "primary_whole:GCA_025152625.1"
      ],
      "challenging_reference_ids": [],
      "in_top_references": false,
      "panel_reference_count": 2,
      "parent": {
        "concept_id": "ECTX-SP022",
        "kind": "species"
      },
      "returned_reference_count": 2
    }
  ],
  "policy_id": "conservative-assembly-anim-v2",
  "policy_mode": "default_candidate",
  "purity_established": false,
  "reasons": [],
  "reference_package": {
    "cohort_coverage_summary": {
      "named_Enterobacter_reference_evidence_present": 1046,
      "named_other_genus_context_reference_absent": 1,
      "restricted_or_out_of_genus_context_reference_absent": 14,
      "reviewed_unassigned_lineage_reference_absent": 9
    },
    "components": {
      "genomovar_chromosome": {
        "builds": [
          {
            "bytes": 1761,
            "path": "metadata/build/genomovar_chromosome/000.artifact",
            "roles": [
              "build:genomovar_chromosome:0"
            ],
            "sha256": "96931123b9de233ea33e66ecb81771c8d48d22b813c0ec167aa2ed254a214f81"
          },
          {
            "bytes": 12,
            "path": "metadata/build/genomovar_chromosome/001.artifact",
            "roles": [
              "build:genomovar_chromosome:1"
            ],
            "sha256": "bfff17ce9354b372251e0fcdbba1f0daf81ff94ccac67eb9349d2cff2724c60d"
          }
        ],
        "database_format": "skani-0.3.2-consolidated-bincode1",
        "databases": {
          "index.db": {
            "bytes": 16962,
            "path": "databases/genomovar_chromosome/index.db",
            "roles": [
              "database:genomovar_chromosome:index.db"
            ],
            "sha256": "3d93da28e0544062d6dc415e731be32c1ff77126805b4cad73ba71998dcb44ac"
          },
          "markers.bin": {
            "bytes": 6527673,
            "path": "databases/genomovar_chromosome/markers.bin",
            "roles": [
              "database:genomovar_chromosome:markers.bin"
            ],
            "sha256": "f85f9f407688c6838809a40e64617584ec2d234a675323d95c898eebbd8e6aec"
          },
          "sketches.db": {
            "bytes": 88221665,
            "path": "databases/genomovar_chromosome/sketches.db",
            "roles": [
              "database:genomovar_chromosome:sketches.db"
            ],
            "sha256": "51d67cf660ceda051ede771890a6e176a1d65823982b09e05fa704e54fed3cf8"
          }
        },
        "engine": "skani",
        "engine_version": "0.3.2",
        "reference_count": 173,
        "reference_role": "genomovar_definition_member",
        "sequence_scope": "historical_chromosome_record_set"
      },
      "primary_whole": {
        "builds": [
          {
            "bytes": 1740,
            "path": "metadata/build/primary_whole/000.artifact",
            "roles": [
              "build:primary_whole:0"
            ],
            "sha256": "5fe47e2146a42d40094667f07562aaefc6d4730e464affd6427a52df11f198ce"
          },
          {
            "bytes": 12,
            "path": "metadata/build/primary_whole/001.artifact",
            "roles": [
              "build:primary_whole:1"
            ],
            "sha256": "bfff17ce9354b372251e0fcdbba1f0daf81ff94ccac67eb9349d2cff2724c60d"
          }
        ],
        "database_format": "skani-0.3.2-consolidated-bincode1",
        "databases": {
          "index.db": {
            "bytes": 12748,
            "path": "databases/primary_whole/index.db",
            "roles": [
              "database:primary_whole:index.db"
            ],
            "sha256": "3123ec038d17f53a08c83005d5e3c0b8d9e33e3b28b35ee93590d2668580396b"
          },
          "markers.bin": {
            "bytes": 5562948,
            "path": "databases/primary_whole/markers.bin",
            "roles": [
              "database:primary_whole:markers.bin"
            ],
            "sha256": "7589c7eca707790a135015db7c409e08d817347c4479a1feaa693871f3b508f8"
          },
          "sketches.db": {
            "bytes": 73466422,
            "path": "databases/primary_whole/sketches.db",
            "roles": [
              "database:primary_whole:sketches.db"
            ],
            "sha256": "9be6a043222deec1b2975483f2d3b021a76935b0b0f13a327300119fa64e99ab"
          }
        },
        "engine": "skani",
        "engine_version": "0.3.2",
        "reference_count": 140,
        "reference_role": "primary_named_reference_evidence",
        "sequence_scope": "whole_assembly_as_deposited"
      }
    },
    "counts": {
      "context_lineage_concepts": 7,
      "development_context_records_not_packaged": 20,
      "eligible_cohort_records": 1070,
      "eligible_species_reference_represented": 1046,
      "genomovar_concepts": 25,
      "historical_chromosome_definition_references": 173,
      "named_concepts": 35,
      "primary_historical_type_accessions": 33,
      "primary_whole_references": 140,
      "reference_scope_records": 313,
      "unique_accessions": 305
    },
    "licence": {
      "ncbi_submitter_rights_disclaimer": "The reference sketches in this package were derived from assemblies obtained from NCBI databases. NCBI's molecular data usage policy states: \"some submitters of the original data (or the country of origin of such data) may claim patent, copyright, or other intellectual property rights in all or a portion of the data (that has been submitted). NCBI is not in a position to assess the validity of such claims and since there is no transfer of rights from submitters to NCBI, NCBI has no rights to transfer to a third party. Therefore, NCBI cannot provide comment or unrestricted permission concerning the use, copying, or distribution of the information contained in the molecular databases.\" Source: https://www.ncbi.nlm.nih.gov/home/about/policies/ (Molecular Data Usage), retrieved 2026-10-09.",
      "package_version": "2026-10-15",
      "schema_version": "2.0.0-reference-licence-manifest",
      "sha256": "bd5ec5711313bd1f457a9a36aa009fb0671b73c7f58cdf242ba1eed4ce1f6b94"
    },
    "package": {
      "converted_from_sha256": null,
      "export_validation_sha256": "9abd37288a3a4594d8e0d04a82db7d198c906038f7f8a9814f7d97607994eb46",
      "id": "enterobacter-reference",
      "manifest_sha256": "f7c82d8e912fdb08aec93b190316f482fd462b3c514c5b374f8c694af1278e28",
      "release_state": "public_reference_export",
      "schema_version": "2.1.0-public-portable-reference-package",
      "source_manifest_sha256": "f6e822072b532a5ae90a3d9e09b5d2e47a2f87dbf3cc69824e48ebd022a668c5",
      "trust_basis": "catalogue_pinned_manifest_digest_and_export_attestation",
      "version": "2026-10-15"
    },
    "status": "verified"
  },
  "rescue_status": "not_triggered",
  "schema": "3.0.0-conditional-assembly-report",
  "scope_assessment": {
    "outcome": "not_assessed",
    "reason": "No scope assessment supplied; coverage alone does not explain extra sequence."
  },
  "settings_sha256": "a09608fda315c530db1f6699c4e25e3e6ac0c2b26cde26e60dbe9c467110089b",
  "species_id": "ECTX-SP025",
  "species_name": "Enterobacter xiangfangensis",
  "status": "assigned",
  "subspecies_id": "ECTX-SS007",
  "subspecies_name": "Enterobacter xiangfangensis subsp. hoffmannii",
  "subspecies_reason": "diagnostic_candidate_only",
  "thresholds": {
    "both_af_minimum": "80",
    "conflict_ani": "96",
    "species_ani": "96",
    "subspecies_ani": "98",
    "subspecies_margin_percentage_points": "1",
    "supplied": null,
    "trigger_lower_ani": "94.5"
  },
  "top_references": [
    {
      "anim": null,
      "lineage_id": null,
      "parent": {
        "concept_id": "ECTX-SP025",
        "kind": "species"
      },
      "reference_id": "primary_whole:GCA_013738375.1",
      "reference_role": "diversity",
      "reference_sha256": "603ed679732e01cb7d1a06ec73d89a53fc12b6f6b22f071df5dee866cdf982b9",
      "skani": {
        "af_query_percent": 99.99,
        "af_reference_percent": 99.99,
        "ani_percent": 100.0
      },
      "species_id": "ECTX-SP025",
      "species_name": "Enterobacter xiangfangensis",
      "subspecies_id": "ECTX-SS007",
      "tie_group": 0
    },
    {
      "anim": null,
      "lineage_id": null,
      "parent": {
        "concept_id": "ECTX-SP025",
        "kind": "species"
      },
      "reference_id": "primary_whole:GCA_001729745.1",
      "reference_role": "type_anchor",
      "reference_sha256": "c30376cf10d005baad5e405ffa7bfc93fa6575e86c4f9c8af33fb866b0661dba",
      "skani": {
        "af_query_percent": 82.69,
        "af_reference_percent": 92.17,
        "ani_percent": 98.97
      },
      "species_id": "ECTX-SP025",
      "species_name": "Enterobacter xiangfangensis",
      "subspecies_id": "ECTX-SS007",
      "tie_group": 1
    },
    {
      "anim": null,
      "lineage_id": null,
      "parent": {
        "concept_id": "ECTX-SP025",
        "kind": "species"
      },
      "reference_id": "primary_whole:GCA_013625435.1",
      "reference_role": "diversity",
      "reference_sha256": "a0845ff9355766a769d9583c285d14c7d59e66fe6c9fc6ae67f2c0ad140c7da3",
      "skani": {
        "af_query_percent": 85.66,
        "af_reference_percent": 90.75,
        "ani_percent": 98.97
      },
      "species_id": "ECTX-SP025",
      "species_name": "Enterobacter xiangfangensis",
      "subspecies_id": "ECTX-SS007",
      "tie_group": 1
    },
    {
      "anim": null,
      "lineage_id": null,
      "parent": {
        "concept_id": "ECTX-SP025",
        "kind": "species"
      },
      "reference_id": "primary_whole:GCA_052922205.1",
      "reference_role": "type_anchor",
      "reference_sha256": "1ba5d6a2314707d43860d60c7ca17b34fe846574a2d6bbe015dbaf7d0b9af1f1",
      "skani": {
        "af_query_percent": 85.51,
        "af_reference_percent": 91.21,
        "ani_percent": 98.97
      },
      "species_id": "ECTX-SP025",
      "species_name": "Enterobacter xiangfangensis",
      "subspecies_id": "ECTX-SS007",
      "tie_group": 1
    },
    {
      "anim": null,
      "lineage_id": null,
      "parent": {
        "concept_id": "ECTX-SP025",
        "kind": "species"
      },
      "reference_id": "primary_whole:GCA_027595125.1",
      "reference_role": "diversity",
      "reference_sha256": "ddc667e9e2c0cf266983795da29deb09ba27da18cf0cce0a5c80a18a305d2bfb",
      "skani": {
        "af_query_percent": 83.07,
        "af_reference_percent": 90.16,
        "ani_percent": 98.92
      },
      "species_id": "ECTX-SP025",
      "species_name": "Enterobacter xiangfangensis",
      "subspecies_id": "ECTX-SS007",
      "tie_group": 2
    }
  ],
  "trigger": false,
  "trigger_state": "at_or_above_96_v1_route",
  "validation_status": "not_yet_validated",
  "versions": {
    "anim_method": "reciprocal-mummer4-4.0.1-preserve-n-mum-1-span-v1",
    "evidence_schema": "2.0.0-dev-evidence",
    "implementation": "0.0.0",
    "policy": "conservative-assembly-anim-v2",
    "policy_contract": "P1-r1",
    "reference_data": {
      "manifest_sha256": "f7c82d8e912fdb08aec93b190316f482fd462b3c514c5b374f8c694af1278e28",
      "package_id": "enterobacter-reference",
      "package_version": "2026-10-15",
      "schema_version": "2.1.0-public-portable-reference-package"
    },
    "report_schema": "3.0.0-conditional-assembly-report",
    "skani_engine_version": "0.3.2",
    "skani_method": "skani-0.3.2-avx2-content-order-dna-v2",
    "validation": "not_yet_validated"
  },
  "witness": null,
  "witness_assessment": [
    {
      "anim": null,
      "finished": false,
      "reference_id": "primary_whole:GCA_013743755.1",
      "skani": {
        "af_query_percent": 80.09,
        "af_reference_percent": 86.85,
        "ani_percent": 95.89
      },
      "strict_pass": false
    },
    {
      "anim": null,
      "finished": false,
      "reference_id": "primary_whole:GCA_002204775.1",
      "skani": {
        "af_query_percent": 80.45,
        "af_reference_percent": 83.23,
        "ani_percent": 95.74
      },
      "strict_pass": false
    },
    {
      "anim": null,
      "finished": false,
      "reference_id": "primary_whole:GCA_030411255.2",
      "skani": {
        "af_query_percent": 80.08,
        "af_reference_percent": 82.6,
        "ani_percent": 95.51
      },
      "strict_pass": false
    },
    {
      "anim": null,
      "finished": false,
      "reference_id": "primary_whole:GCA_043965205.1",
      "skani": {
        "af_query_percent": 81.37,
        "af_reference_percent": 81.15,
        "ani_percent": 95.4
      },
      "strict_pass": false
    }
  ]
}
